Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trbv12-2A0A0B4J1H1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Gm45364-201ENSMUST00000210883 159 ntBASIC16.73■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.71■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.71■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv12-2A0A0B4J1H1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Gm6821-201ENSMUST00000107540 542 ntBASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv12-2A0A0B4J1H1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.68■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.68■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.68■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trbv12-2A0A0B4J1H1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-2A0A0B4J1H1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-2A0A0B4J1H1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-2A0A0B4J1H1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Trbv12-2A0A0B4J1H1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv12-2A0A0B4J1H1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms