Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-7A0A075B6B0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-7A0A075B6B0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav6d-7A0A075B6B0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-7A0A075B6B0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-7A0A075B6B0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-7A0A075B6B0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav6d-7A0A075B6B0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-7A0A075B6B0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-7A0A075B6B0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-7A0A075B6B0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-7A0A075B6B0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-7A0A075B6B0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-7A0A075B6B0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-7A0A075B6B0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-7A0A075B6B0 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.22■□□□□ 0.19
Trav6d-7A0A075B6B0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav6d-7A0A075B6B0 Notumos-201ENSMUST00000151998 2659 ntBASIC16.22■□□□□ 0.19
Trav6d-7A0A075B6B0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-7A0A075B6B0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-7A0A075B6B0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav6d-7A0A075B6B0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav6d-7A0A075B6B0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-7A0A075B6B0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-7A0A075B6B0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav6d-7A0A075B6B0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6d-7A0A075B6B0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6d-7A0A075B6B0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Gm5921-201ENSMUST00000075898 882 ntBASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-7A0A075B6B0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav6d-7A0A075B6B0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-7A0A075B6B0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-7A0A075B6B0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-7A0A075B6B0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-7A0A075B6B0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-7A0A075B6B0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 147.6 ms