Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Rab21-202ENSMUST00000218831 843 ntBASIC32.99■■■□□ 2.87
Hmg20bQ9Z104 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.96■■■□□ 2.87
Hmg20bQ9Z104 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Hmg20bQ9Z104 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Hmg20bQ9Z104 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
Hmg20bQ9Z104 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Hmg20bQ9Z104 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
Hmg20bQ9Z104 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Hmg20bQ9Z104 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Hmg20bQ9Z104 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.78■■■□□ 2.84
Hmg20bQ9Z104 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hmg20bQ9Z104 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Hmg20bQ9Z104 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
Hmg20bQ9Z104 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Hmg20bQ9Z104 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Hmg20bQ9Z104 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Hmg20bQ9Z104 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Hmg20bQ9Z104 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Hmg20bQ9Z104 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Hmg20bQ9Z104 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.52■■■□□ 2.8
Hmg20bQ9Z104 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.49■■■□□ 2.79
Hmg20bQ9Z104 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.49■■■□□ 2.79
Hmg20bQ9Z104 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.47■■■□□ 2.79
Hmg20bQ9Z104 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Hmg20bQ9Z104 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Hmg20bQ9Z104 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Hmg20bQ9Z104 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
Hmg20bQ9Z104 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Hmg20bQ9Z104 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Hmg20bQ9Z104 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Hmg20bQ9Z104 Gm25262-201ENSMUST00000174934 133 ntBASIC32.35■■■□□ 2.77
Hmg20bQ9Z104 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Hmg20bQ9Z104 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.35■■■□□ 2.77
Hmg20bQ9Z104 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.34■■■□□ 2.77
Hmg20bQ9Z104 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Hmg20bQ9Z104 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Hmg20bQ9Z104 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Hmg20bQ9Z104 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Hmg20bQ9Z104 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Hmg20bQ9Z104 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Hmg20bQ9Z104 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Hmg20bQ9Z104 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.08■■■□□ 2.73
Hmg20bQ9Z104 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.07■■■□□ 2.72
Hmg20bQ9Z104 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
Hmg20bQ9Z104 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Hmg20bQ9Z104 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Hmg20bQ9Z104 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Hmg20bQ9Z104 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Hmg20bQ9Z104 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Hmg20bQ9Z104 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Hmg20bQ9Z104 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Hmg20bQ9Z104 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Hmg20bQ9Z104 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
Hmg20bQ9Z104 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Hmg20bQ9Z104 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
Hmg20bQ9Z104 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Hmg20bQ9Z104 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Hmg20bQ9Z104 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Hmg20bQ9Z104 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.8■■■□□ 2.68
Hmg20bQ9Z104 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.79■■■□□ 2.68
Hmg20bQ9Z104 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
Hmg20bQ9Z104 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.75■■■□□ 2.67
Hmg20bQ9Z104 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.74■■■□□ 2.67
Hmg20bQ9Z104 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Hmg20bQ9Z104 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
Hmg20bQ9Z104 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Hmg20bQ9Z104 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
Hmg20bQ9Z104 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Hmg20bQ9Z104 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Hmg20bQ9Z104 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Hmg20bQ9Z104 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.65
Hmg20bQ9Z104 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Hmg20bQ9Z104 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.57■■■□□ 2.64
Hmg20bQ9Z104 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.57■■■□□ 2.64
Hmg20bQ9Z104 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Hmg20bQ9Z104 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Hmg20bQ9Z104 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Hmg20bQ9Z104 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Hmg20bQ9Z104 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Hmg20bQ9Z104 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hmg20bQ9Z104 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Hmg20bQ9Z104 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Hmg20bQ9Z104 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.48■■■□□ 2.63
Hmg20bQ9Z104 Mipep-204ENSMUST00000225043 1548 ntBASIC31.47■■■□□ 2.63
Hmg20bQ9Z104 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Hmg20bQ9Z104 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Hmg20bQ9Z104 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
Hmg20bQ9Z104 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.44■■■□□ 2.62
Hmg20bQ9Z104 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
Hmg20bQ9Z104 Gm27322-201ENSMUST00000184007 104 ntBASIC31.41■■■□□ 2.62
Hmg20bQ9Z104 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.4■■■□□ 2.62
Hmg20bQ9Z104 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.4■■■□□ 2.62
Hmg20bQ9Z104 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Hmg20bQ9Z104 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.36■■■□□ 2.61
Hmg20bQ9Z104 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.29■■■□□ 2.6
Hmg20bQ9Z104 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.27■■■□□ 2.6
Hmg20bQ9Z104 Gm26115-201ENSMUST00000175605 87 ntBASIC31.25■■■□□ 2.59
Hmg20bQ9Z104 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Hmg20bQ9Z104 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Hmg20bQ9Z104 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.21■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms