Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
RpgrQ9R0X5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RpgrQ9R0X5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RpgrQ9R0X5 Gm25262-201ENSMUST00000174934 133 ntBASIC27.27■■□□□ 1.96
RpgrQ9R0X5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RpgrQ9R0X5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RpgrQ9R0X5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.22■■□□□ 1.95
RpgrQ9R0X5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RpgrQ9R0X5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RpgrQ9R0X5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RpgrQ9R0X5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RpgrQ9R0X5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
RpgrQ9R0X5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RpgrQ9R0X5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RpgrQ9R0X5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RpgrQ9R0X5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
RpgrQ9R0X5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.06■■□□□ 1.92
RpgrQ9R0X5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.92
RpgrQ9R0X5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.99■■□□□ 1.91
RpgrQ9R0X5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RpgrQ9R0X5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
RpgrQ9R0X5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.94■■□□□ 1.9
RpgrQ9R0X5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.92■■□□□ 1.9
RpgrQ9R0X5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
RpgrQ9R0X5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
RpgrQ9R0X5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RpgrQ9R0X5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RpgrQ9R0X5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RpgrQ9R0X5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
RpgrQ9R0X5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RpgrQ9R0X5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
RpgrQ9R0X5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RpgrQ9R0X5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.84■■□□□ 1.89
RpgrQ9R0X5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
RpgrQ9R0X5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RpgrQ9R0X5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RpgrQ9R0X5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RpgrQ9R0X5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RpgrQ9R0X5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
RpgrQ9R0X5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RpgrQ9R0X5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.73■■□□□ 1.87
RpgrQ9R0X5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RpgrQ9R0X5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.68■■□□□ 1.86
RpgrQ9R0X5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.67■■□□□ 1.86
RpgrQ9R0X5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RpgrQ9R0X5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.64■■□□□ 1.86
RpgrQ9R0X5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RpgrQ9R0X5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RpgrQ9R0X5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RpgrQ9R0X5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.59■■□□□ 1.85
RpgrQ9R0X5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RpgrQ9R0X5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
RpgrQ9R0X5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RpgrQ9R0X5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RpgrQ9R0X5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
RpgrQ9R0X5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RpgrQ9R0X5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RpgrQ9R0X5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RpgrQ9R0X5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RpgrQ9R0X5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RpgrQ9R0X5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RpgrQ9R0X5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.44■■□□□ 1.82
RpgrQ9R0X5 Gm26115-201ENSMUST00000175605 87 ntBASIC26.43■■□□□ 1.82
RpgrQ9R0X5 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.43■■□□□ 1.82
RpgrQ9R0X5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
RpgrQ9R0X5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.42■■□□□ 1.82
RpgrQ9R0X5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RpgrQ9R0X5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RpgrQ9R0X5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RpgrQ9R0X5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RpgrQ9R0X5 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.35■■□□□ 1.81
RpgrQ9R0X5 Gm27322-201ENSMUST00000184007 104 ntBASIC26.32■■□□□ 1.8
RpgrQ9R0X5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.32■■□□□ 1.8
RpgrQ9R0X5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RpgrQ9R0X5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RpgrQ9R0X5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
RpgrQ9R0X5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RpgrQ9R0X5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.26■■□□□ 1.79
RpgrQ9R0X5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RpgrQ9R0X5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RpgrQ9R0X5 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.25■■□□□ 1.79
RpgrQ9R0X5 Gm8109-201ENSMUST00000194076 746 ntBASIC26.22■■□□□ 1.79
RpgrQ9R0X5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.2■■□□□ 1.78
RpgrQ9R0X5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RpgrQ9R0X5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RpgrQ9R0X5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RpgrQ9R0X5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RpgrQ9R0X5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RpgrQ9R0X5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RpgrQ9R0X5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RpgrQ9R0X5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RpgrQ9R0X5 Zxda-201ENSMUST00000117281 2621 ntBASIC26.07■■□□□ 1.76
RpgrQ9R0X5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RpgrQ9R0X5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RpgrQ9R0X5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RpgrQ9R0X5 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.04■■□□□ 1.76
RpgrQ9R0X5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RpgrQ9R0X5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RpgrQ9R0X5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RpgrQ9R0X5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms