Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.92■■■□□ 2.54
CISHQ9NSE2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CISHQ9NSE2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CISHQ9NSE2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CISHQ9NSE2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CISHQ9NSE2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
CISHQ9NSE2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
CISHQ9NSE2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CISHQ9NSE2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.75■■■□□ 2.51
CISHQ9NSE2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.73■■■□□ 2.51
CISHQ9NSE2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CISHQ9NSE2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
CISHQ9NSE2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CISHQ9NSE2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CISHQ9NSE2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CISHQ9NSE2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
CISHQ9NSE2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.63■■■□□ 2.49
CISHQ9NSE2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CISHQ9NSE2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CISHQ9NSE2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CISHQ9NSE2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.58■■■□□ 2.49
CISHQ9NSE2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.57■■■□□ 2.48
CISHQ9NSE2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.56■■■□□ 2.48
CISHQ9NSE2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CISHQ9NSE2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CISHQ9NSE2 AP002365.1-201ENST00000603448 772 ntBASIC30.54■■■□□ 2.48
CISHQ9NSE2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CISHQ9NSE2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CISHQ9NSE2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CISHQ9NSE2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CISHQ9NSE2 DYNLL1-208ENST00000550178 581 ntBASIC30.5■■■□□ 2.47
CISHQ9NSE2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.49■■■□□ 2.47
CISHQ9NSE2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
CISHQ9NSE2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.47■■■□□ 2.47
CISHQ9NSE2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.46■■■□□ 2.47
CISHQ9NSE2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
CISHQ9NSE2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
CISHQ9NSE2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.42■■■□□ 2.46
CISHQ9NSE2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CISHQ9NSE2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CISHQ9NSE2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CISHQ9NSE2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CISHQ9NSE2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.38■■■□□ 2.45
CISHQ9NSE2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CISHQ9NSE2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CISHQ9NSE2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.36■■■□□ 2.45
CISHQ9NSE2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CISHQ9NSE2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CISHQ9NSE2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
CISHQ9NSE2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CISHQ9NSE2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CISHQ9NSE2 AL031258.1-201ENST00000623562 325 ntBASIC30.29■■■□□ 2.44
CISHQ9NSE2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CISHQ9NSE2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CISHQ9NSE2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CISHQ9NSE2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.23■■■□□ 2.43
CISHQ9NSE2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.23■■■□□ 2.43
CISHQ9NSE2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CISHQ9NSE2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.22■■■□□ 2.43
CISHQ9NSE2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
CISHQ9NSE2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CISHQ9NSE2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CISHQ9NSE2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.18■■■□□ 2.42
CISHQ9NSE2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CISHQ9NSE2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.17■■■□□ 2.42
CISHQ9NSE2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
CISHQ9NSE2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CISHQ9NSE2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CISHQ9NSE2 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.14■■■□□ 2.42
CISHQ9NSE2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CISHQ9NSE2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
CISHQ9NSE2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CISHQ9NSE2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CISHQ9NSE2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CISHQ9NSE2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.1■■■□□ 2.41
CISHQ9NSE2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CISHQ9NSE2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.09■■■□□ 2.41
CISHQ9NSE2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CISHQ9NSE2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CISHQ9NSE2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CISHQ9NSE2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CISHQ9NSE2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
CISHQ9NSE2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CISHQ9NSE2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CISHQ9NSE2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.96■■■□□ 2.39
CISHQ9NSE2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.94■■■□□ 2.38
CISHQ9NSE2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
CISHQ9NSE2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.92■■■□□ 2.38
CISHQ9NSE2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.92■■■□□ 2.38
CISHQ9NSE2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CISHQ9NSE2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
CISHQ9NSE2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
CISHQ9NSE2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.86■■■□□ 2.37
CISHQ9NSE2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CISHQ9NSE2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.85■■■□□ 2.37
CISHQ9NSE2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
CISHQ9NSE2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CISHQ9NSE2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CISHQ9NSE2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
CISHQ9NSE2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms