Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.07■■□□□ 1.28
Crlf1Q9JM58 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Crlf1Q9JM58 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.05■■□□□ 1.28
Crlf1Q9JM58 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Crlf1Q9JM58 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Crlf1Q9JM58 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Crlf1Q9JM58 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Crlf1Q9JM58 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23■■□□□ 1.27
Crlf1Q9JM58 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.93■■□□□ 1.26
Crlf1Q9JM58 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Crlf1Q9JM58 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.89■■□□□ 1.25
Crlf1Q9JM58 Psd-208ENSMUST00000224556 2034 ntBASIC22.89■■□□□ 1.25
Crlf1Q9JM58 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Crlf1Q9JM58 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.85■■□□□ 1.25
Crlf1Q9JM58 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Crlf1Q9JM58 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Crlf1Q9JM58 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Crlf1Q9JM58 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Crlf1Q9JM58 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Crlf1Q9JM58 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Crlf1Q9JM58 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Crlf1Q9JM58 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Crlf1Q9JM58 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Crlf1Q9JM58 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Crlf1Q9JM58 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.66■■□□□ 1.22
Crlf1Q9JM58 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Crlf1Q9JM58 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Crlf1Q9JM58 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Crlf1Q9JM58 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Crlf1Q9JM58 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Crlf1Q9JM58 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.59■■□□□ 1.21
Crlf1Q9JM58 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Crlf1Q9JM58 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Crlf1Q9JM58 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.54■■□□□ 1.2
Crlf1Q9JM58 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Crlf1Q9JM58 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Crlf1Q9JM58 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.49■■□□□ 1.19
Crlf1Q9JM58 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Crlf1Q9JM58 Gm16148-201ENSMUST00000119653 893 ntBASIC22.45■■□□□ 1.18
Crlf1Q9JM58 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.44■■□□□ 1.18
Crlf1Q9JM58 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Crlf1Q9JM58 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Crlf1Q9JM58 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Crlf1Q9JM58 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Crlf1Q9JM58 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Crlf1Q9JM58 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Crlf1Q9JM58 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Crlf1Q9JM58 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Crlf1Q9JM58 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Crlf1Q9JM58 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Crlf1Q9JM58 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Crlf1Q9JM58 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Crlf1Q9JM58 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Crlf1Q9JM58 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Crlf1Q9JM58 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
Crlf1Q9JM58 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.27■■□□□ 1.16
Crlf1Q9JM58 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.27■■□□□ 1.16
Crlf1Q9JM58 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Crlf1Q9JM58 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Crlf1Q9JM58 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.25■■□□□ 1.15
Crlf1Q9JM58 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Crlf1Q9JM58 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Crlf1Q9JM58 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Crlf1Q9JM58 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Crlf1Q9JM58 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.18■■□□□ 1.14
Crlf1Q9JM58 Gm45855-201ENSMUST00000212546 880 ntBASIC22.15■■□□□ 1.14
Crlf1Q9JM58 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Crlf1Q9JM58 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Crlf1Q9JM58 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.14■■□□□ 1.13
Crlf1Q9JM58 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.14■■□□□ 1.13
Crlf1Q9JM58 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Crlf1Q9JM58 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Crlf1Q9JM58 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.11■■□□□ 1.13
Crlf1Q9JM58 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Crlf1Q9JM58 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Crlf1Q9JM58 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.09■■□□□ 1.13
Crlf1Q9JM58 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.09■■□□□ 1.13
Crlf1Q9JM58 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
Crlf1Q9JM58 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Crlf1Q9JM58 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Crlf1Q9JM58 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Crlf1Q9JM58 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Crlf1Q9JM58 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Crlf1Q9JM58 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Crlf1Q9JM58 Peli2-204ENSMUST00000226513 1320 ntBASIC22.02■■□□□ 1.12
Crlf1Q9JM58 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Crlf1Q9JM58 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Crlf1Q9JM58 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Crlf1Q9JM58 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.94■■□□□ 1.1
Crlf1Q9JM58 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Crlf1Q9JM58 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Crlf1Q9JM58 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Crlf1Q9JM58 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Crlf1Q9JM58 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Crlf1Q9JM58 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Crlf1Q9JM58 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Crlf1Q9JM58 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.9■■□□□ 1.1
Crlf1Q9JM58 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Crlf1Q9JM58 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Crlf1Q9JM58 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms