Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.32■■□□□ 1.64
CXXC4Q9H2H0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CXXC4Q9H2H0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.29■■□□□ 1.64
CXXC4Q9H2H0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
CXXC4Q9H2H0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.29■■□□□ 1.64
CXXC4Q9H2H0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.28■■□□□ 1.64
CXXC4Q9H2H0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CXXC4Q9H2H0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CXXC4Q9H2H0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.24■■□□□ 1.63
CXXC4Q9H2H0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.24■■□□□ 1.63
CXXC4Q9H2H0 AL031258.1-201ENST00000623562 325 ntBASIC25.23■■□□□ 1.63
CXXC4Q9H2H0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CXXC4Q9H2H0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CXXC4Q9H2H0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CXXC4Q9H2H0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CXXC4Q9H2H0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CXXC4Q9H2H0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CXXC4Q9H2H0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
CXXC4Q9H2H0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CXXC4Q9H2H0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.18■■□□□ 1.62
CXXC4Q9H2H0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.17■■□□□ 1.62
CXXC4Q9H2H0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.17■■□□□ 1.62
CXXC4Q9H2H0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.17■■□□□ 1.62
CXXC4Q9H2H0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CXXC4Q9H2H0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CXXC4Q9H2H0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.11■■□□□ 1.61
CXXC4Q9H2H0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CXXC4Q9H2H0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CXXC4Q9H2H0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.08■■□□□ 1.61
CXXC4Q9H2H0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CXXC4Q9H2H0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
CXXC4Q9H2H0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.07■■□□□ 1.6
CXXC4Q9H2H0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CXXC4Q9H2H0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CXXC4Q9H2H0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.06■■□□□ 1.6
CXXC4Q9H2H0 RARRES2P7-201ENST00000567349 469 ntBASIC25.05■■□□□ 1.6
CXXC4Q9H2H0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.05■■□□□ 1.6
CXXC4Q9H2H0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CXXC4Q9H2H0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CXXC4Q9H2H0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CXXC4Q9H2H0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CXXC4Q9H2H0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.93■■□□□ 1.58
CXXC4Q9H2H0 AC097358.2-201ENST00000607541 1159 ntBASIC24.9■■□□□ 1.58
CXXC4Q9H2H0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CXXC4Q9H2H0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CXXC4Q9H2H0 RPS2P35-201ENST00000443417 897 ntBASIC24.84■■□□□ 1.57
CXXC4Q9H2H0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.83■■□□□ 1.57
CXXC4Q9H2H0 AC136428.2-201ENST00000563187 214 ntBASIC24.82■■□□□ 1.56
CXXC4Q9H2H0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CXXC4Q9H2H0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CXXC4Q9H2H0 SUZ12P1-203ENST00000578195 985 ntBASIC24.8■■□□□ 1.56
CXXC4Q9H2H0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CXXC4Q9H2H0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
CXXC4Q9H2H0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CXXC4Q9H2H0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CXXC4Q9H2H0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CXXC4Q9H2H0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.75■■□□□ 1.55
CXXC4Q9H2H0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CXXC4Q9H2H0 SETD8P1-201ENST00000623146 1180 ntBASIC24.74■■□□□ 1.55
CXXC4Q9H2H0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CXXC4Q9H2H0 AC145285.7-201ENST00000614819 1539 ntBASIC24.72■■□□□ 1.55
CXXC4Q9H2H0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CXXC4Q9H2H0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
CXXC4Q9H2H0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CXXC4Q9H2H0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CXXC4Q9H2H0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.68■■□□□ 1.54
CXXC4Q9H2H0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CXXC4Q9H2H0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.65■■□□□ 1.54
CXXC4Q9H2H0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.64■■□□□ 1.54
CXXC4Q9H2H0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CXXC4Q9H2H0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.62■■□□□ 1.53
CXXC4Q9H2H0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CXXC4Q9H2H0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.61■■□□□ 1.53
CXXC4Q9H2H0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CXXC4Q9H2H0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CXXC4Q9H2H0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CXXC4Q9H2H0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.57■■□□□ 1.52
CXXC4Q9H2H0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CXXC4Q9H2H0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.56■■□□□ 1.52
CXXC4Q9H2H0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CXXC4Q9H2H0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.55■■□□□ 1.52
CXXC4Q9H2H0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.54■■□□□ 1.52
CXXC4Q9H2H0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CXXC4Q9H2H0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.53■■□□□ 1.52
CXXC4Q9H2H0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CXXC4Q9H2H0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CXXC4Q9H2H0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CXXC4Q9H2H0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.48■■□□□ 1.51
CXXC4Q9H2H0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.44■■□□□ 1.5
CXXC4Q9H2H0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CXXC4Q9H2H0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CXXC4Q9H2H0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CXXC4Q9H2H0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CXXC4Q9H2H0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.4■■□□□ 1.5
CXXC4Q9H2H0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CXXC4Q9H2H0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.39■■□□□ 1.49
CXXC4Q9H2H0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CXXC4Q9H2H0 AL162393.1-201ENST00000437852 946 ntBASIC24.38■■□□□ 1.49
CXXC4Q9H2H0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
CXXC4Q9H2H0 AP006261.1-201ENST00000584783 668 ntBASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms