Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
SPTBN4Q9H254 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SPTBN4Q9H254 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
SPTBN4Q9H254 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.31■■■□□ 2.28
SPTBN4Q9H254 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SPTBN4Q9H254 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SPTBN4Q9H254 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.28■■■□□ 2.28
SPTBN4Q9H254 AL031258.1-201ENST00000623562 325 ntBASIC29.27■■■□□ 2.28
SPTBN4Q9H254 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.26■■■□□ 2.28
SPTBN4Q9H254 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.25■■■□□ 2.27
SPTBN4Q9H254 HLA-V-202ENST00000446817 847 ntBASIC29.24■■■□□ 2.27
SPTBN4Q9H254 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SPTBN4Q9H254 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.2■■■□□ 2.27
SPTBN4Q9H254 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SPTBN4Q9H254 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.16■■■□□ 2.26
SPTBN4Q9H254 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.16■■■□□ 2.26
SPTBN4Q9H254 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SPTBN4Q9H254 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
SPTBN4Q9H254 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.13■■■□□ 2.25
SPTBN4Q9H254 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
SPTBN4Q9H254 AL162393.1-201ENST00000437852 946 ntBASIC29.12■■■□□ 2.25
SPTBN4Q9H254 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SPTBN4Q9H254 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
SPTBN4Q9H254 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.11■■■□□ 2.25
SPTBN4Q9H254 SETD8P1-201ENST00000623146 1180 ntBASIC29.09■■■□□ 2.25
SPTBN4Q9H254 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.24
SPTBN4Q9H254 MIR7108-201ENST00000614319 87 ntBASIC29.07■■■□□ 2.24
SPTBN4Q9H254 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.06■■■□□ 2.24
SPTBN4Q9H254 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.04■■■□□ 2.24
SPTBN4Q9H254 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SPTBN4Q9H254 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29■■■□□ 2.23
SPTBN4Q9H254 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
SPTBN4Q9H254 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SPTBN4Q9H254 ABHD17AP4-201ENST00000411545 909 ntBASIC28.94■■■□□ 2.22
SPTBN4Q9H254 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.94■■■□□ 2.22
SPTBN4Q9H254 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.9■■■□□ 2.22
SPTBN4Q9H254 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SPTBN4Q9H254 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SPTBN4Q9H254 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SPTBN4Q9H254 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SPTBN4Q9H254 AP006261.1-201ENST00000584783 668 ntBASIC28.84■■■□□ 2.21
SPTBN4Q9H254 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SPTBN4Q9H254 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SPTBN4Q9H254 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPTBN4Q9H254 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.78■■■□□ 2.2
SPTBN4Q9H254 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SPTBN4Q9H254 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.76■■■□□ 2.19
SPTBN4Q9H254 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
SPTBN4Q9H254 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.75■■■□□ 2.19
SPTBN4Q9H254 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SPTBN4Q9H254 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SPTBN4Q9H254 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.71■■■□□ 2.19
SPTBN4Q9H254 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
SPTBN4Q9H254 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
SPTBN4Q9H254 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.66■■■□□ 2.18
SPTBN4Q9H254 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.64■■■□□ 2.18
SPTBN4Q9H254 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.63■■■□□ 2.17
SPTBN4Q9H254 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.63■■■□□ 2.17
SPTBN4Q9H254 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SPTBN4Q9H254 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SPTBN4Q9H254 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC28.6■■■□□ 2.17
SPTBN4Q9H254 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
SPTBN4Q9H254 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.57■■■□□ 2.16
SPTBN4Q9H254 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SPTBN4Q9H254 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SPTBN4Q9H254 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.53■■■□□ 2.16
SPTBN4Q9H254 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.51■■■□□ 2.15
SPTBN4Q9H254 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
SPTBN4Q9H254 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SPTBN4Q9H254 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.49■■■□□ 2.15
SPTBN4Q9H254 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
SPTBN4Q9H254 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.48■■■□□ 2.15
SPTBN4Q9H254 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
SPTBN4Q9H254 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
SPTBN4Q9H254 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SPTBN4Q9H254 CAHM-201ENST00000604200 896 ntBASIC28.44■■■□□ 2.14
SPTBN4Q9H254 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.42■■■□□ 2.14
SPTBN4Q9H254 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.41■■■□□ 2.14
SPTBN4Q9H254 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SPTBN4Q9H254 AL391121.1-201ENST00000607967 1349 ntBASIC28.38■■■□□ 2.13
SPTBN4Q9H254 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.37■■■□□ 2.13
SPTBN4Q9H254 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SPTBN4Q9H254 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SPTBN4Q9H254 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.35■■■□□ 2.13
SPTBN4Q9H254 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.35■■■□□ 2.13
SPTBN4Q9H254 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SPTBN4Q9H254 MIR3665-201ENST00000578708 105 ntBASIC28.34■■■□□ 2.13
SPTBN4Q9H254 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SPTBN4Q9H254 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.32■■■□□ 2.12
SPTBN4Q9H254 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.3■■■□□ 2.12
SPTBN4Q9H254 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.29■■■□□ 2.12
SPTBN4Q9H254 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.28■■■□□ 2.12
SPTBN4Q9H254 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.28■■■□□ 2.12
SPTBN4Q9H254 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.27■■■□□ 2.12
SPTBN4Q9H254 MIR4449-201ENST00000578365 66 ntBASIC28.27■■■□□ 2.12
SPTBN4Q9H254 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.26■■■□□ 2.11
SPTBN4Q9H254 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SPTBN4Q9H254 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SPTBN4Q9H254 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SPTBN4Q9H254 AC087741.3-201ENST00000624270 1347 ntBASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms