Protein–RNA interactions for Protein: Q9CQL2

Ccer1, Coiled-coil domain-containing glutamate-rich protein 1, mousemouse

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccer1Q9CQL2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.65■■■□□ 2.66
Ccer1Q9CQL2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ccer1Q9CQL2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ccer1Q9CQL2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ccer1Q9CQL2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ccer1Q9CQL2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ccer1Q9CQL2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.55■■■□□ 2.64
Ccer1Q9CQL2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ccer1Q9CQL2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ccer1Q9CQL2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
Ccer1Q9CQL2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.33■■■□□ 2.61
Ccer1Q9CQL2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ccer1Q9CQL2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Ccer1Q9CQL2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Ccer1Q9CQL2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ccer1Q9CQL2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.21■■■□□ 2.59
Ccer1Q9CQL2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Ccer1Q9CQL2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ccer1Q9CQL2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.17■■■□□ 2.58
Ccer1Q9CQL2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ccer1Q9CQL2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Ccer1Q9CQL2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.15■■■□□ 2.58
Ccer1Q9CQL2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccer1Q9CQL2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ccer1Q9CQL2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Ccer1Q9CQL2 Rab21-202ENSMUST00000218831 843 ntBASIC31.05■■■□□ 2.56
Ccer1Q9CQL2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.56
Ccer1Q9CQL2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31■■■□□ 2.55
Ccer1Q9CQL2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.98■■■□□ 2.55
Ccer1Q9CQL2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Ccer1Q9CQL2 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.92■■■□□ 2.54
Ccer1Q9CQL2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ccer1Q9CQL2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ccer1Q9CQL2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
Ccer1Q9CQL2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Ccer1Q9CQL2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
Ccer1Q9CQL2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ccer1Q9CQL2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Ccer1Q9CQL2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.84■■■□□ 2.53
Ccer1Q9CQL2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30.83■■■□□ 2.53
Ccer1Q9CQL2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccer1Q9CQL2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.8■■■□□ 2.52
Ccer1Q9CQL2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.79■■■□□ 2.52
Ccer1Q9CQL2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
Ccer1Q9CQL2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Ccer1Q9CQL2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
Ccer1Q9CQL2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Ccer1Q9CQL2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccer1Q9CQL2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Ccer1Q9CQL2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Ccer1Q9CQL2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
Ccer1Q9CQL2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Ccer1Q9CQL2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Ccer1Q9CQL2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccer1Q9CQL2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Ccer1Q9CQL2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.63■■■□□ 2.49
Ccer1Q9CQL2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ccer1Q9CQL2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccer1Q9CQL2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.57■■■□□ 2.48
Ccer1Q9CQL2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccer1Q9CQL2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccer1Q9CQL2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccer1Q9CQL2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccer1Q9CQL2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccer1Q9CQL2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccer1Q9CQL2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccer1Q9CQL2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccer1Q9CQL2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Ccer1Q9CQL2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ccer1Q9CQL2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Ccer1Q9CQL2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccer1Q9CQL2 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.43■■■□□ 2.46
Ccer1Q9CQL2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Ccer1Q9CQL2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Ccer1Q9CQL2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Ccer1Q9CQL2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.27■■■□□ 2.44
Ccer1Q9CQL2 Gm25262-201ENSMUST00000174934 133 ntBASIC30.27■■■□□ 2.44
Ccer1Q9CQL2 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.25■■■□□ 2.43
Ccer1Q9CQL2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Ccer1Q9CQL2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.22■■■□□ 2.43
Ccer1Q9CQL2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ccer1Q9CQL2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
Ccer1Q9CQL2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ccer1Q9CQL2 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.17■■■□□ 2.42
Ccer1Q9CQL2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Ccer1Q9CQL2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccer1Q9CQL2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ccer1Q9CQL2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccer1Q9CQL2 Mipep-204ENSMUST00000225043 1548 ntBASIC30.05■■■□□ 2.4
Ccer1Q9CQL2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ccer1Q9CQL2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccer1Q9CQL2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ccer1Q9CQL2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Ccer1Q9CQL2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ccer1Q9CQL2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.01■■■□□ 2.39
Ccer1Q9CQL2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
Ccer1Q9CQL2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.99■■■□□ 2.39
Ccer1Q9CQL2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Ccer1Q9CQL2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ccer1Q9CQL2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms