Protein–RNA interactions for Protein: Q96LT9

RNPC3, RNA-binding protein 40, humanhuman

Known RBP Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3Q96LT9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.66■■■□□ 2.82
RNPC3Q96LT9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RNPC3Q96LT9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.65■■■□□ 2.82
RNPC3Q96LT9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.65■■■□□ 2.82
RNPC3Q96LT9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.63■■■□□ 2.81
RNPC3Q96LT9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
RNPC3Q96LT9 AL031258.1-201ENST00000623562 325 ntBASIC32.61■■■□□ 2.81
RNPC3Q96LT9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.6■■■□□ 2.81
RNPC3Q96LT9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.59■■■□□ 2.81
RNPC3Q96LT9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.59■■■□□ 2.81
RNPC3Q96LT9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RNPC3Q96LT9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.56■■■□□ 2.8
RNPC3Q96LT9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RNPC3Q96LT9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.54■■■□□ 2.8
RNPC3Q96LT9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RNPC3Q96LT9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
RNPC3Q96LT9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.53■■■□□ 2.8
RNPC3Q96LT9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.49■■■□□ 2.79
RNPC3Q96LT9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
RNPC3Q96LT9 RARRES2P7-201ENST00000567349 469 ntBASIC32.45■■■□□ 2.79
RNPC3Q96LT9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RNPC3Q96LT9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RNPC3Q96LT9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
RNPC3Q96LT9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RNPC3Q96LT9 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
RNPC3Q96LT9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.28■■■□□ 2.76
RNPC3Q96LT9 AC097358.2-201ENST00000607541 1159 ntBASIC32.24■■■□□ 2.75
RNPC3Q96LT9 RPS2P35-201ENST00000443417 897 ntBASIC32.17■■■□□ 2.74
RNPC3Q96LT9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
RNPC3Q96LT9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
RNPC3Q96LT9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.12■■■□□ 2.73
RNPC3Q96LT9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
RNPC3Q96LT9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.09■■■□□ 2.73
RNPC3Q96LT9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RNPC3Q96LT9 AC136428.2-201ENST00000563187 214 ntBASIC32.07■■■□□ 2.72
RNPC3Q96LT9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RNPC3Q96LT9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.04■■■□□ 2.72
RNPC3Q96LT9 SETD8P1-201ENST00000623146 1180 ntBASIC32.04■■■□□ 2.72
RNPC3Q96LT9 SUZ12P1-203ENST00000578195 985 ntBASIC32.02■■■□□ 2.72
RNPC3Q96LT9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
RNPC3Q96LT9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
RNPC3Q96LT9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RNPC3Q96LT9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.96■■■□□ 2.71
RNPC3Q96LT9 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
RNPC3Q96LT9 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.93■■■□□ 2.7
RNPC3Q96LT9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
RNPC3Q96LT9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RNPC3Q96LT9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RNPC3Q96LT9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RNPC3Q96LT9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.87■■■□□ 2.69
RNPC3Q96LT9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.86■■■□□ 2.69
RNPC3Q96LT9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.85■■■□□ 2.69
RNPC3Q96LT9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
RNPC3Q96LT9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.83■■■□□ 2.69
RNPC3Q96LT9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RNPC3Q96LT9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RNPC3Q96LT9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.8■■■□□ 2.68
RNPC3Q96LT9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
RNPC3Q96LT9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
RNPC3Q96LT9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RNPC3Q96LT9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
RNPC3Q96LT9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.76■■■□□ 2.67
RNPC3Q96LT9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.74■■■□□ 2.67
RNPC3Q96LT9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.73■■■□□ 2.67
RNPC3Q96LT9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.73■■■□□ 2.67
RNPC3Q96LT9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.7■■■□□ 2.67
RNPC3Q96LT9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RNPC3Q96LT9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.65■■■□□ 2.66
RNPC3Q96LT9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
RNPC3Q96LT9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
RNPC3Q96LT9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RNPC3Q96LT9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.61■■■□□ 2.65
RNPC3Q96LT9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RNPC3Q96LT9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
RNPC3Q96LT9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RNPC3Q96LT9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RNPC3Q96LT9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
RNPC3Q96LT9 AL162393.1-201ENST00000437852 946 ntBASIC31.52■■■□□ 2.64
RNPC3Q96LT9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.51■■■□□ 2.63
RNPC3Q96LT9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
RNPC3Q96LT9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RNPC3Q96LT9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RNPC3Q96LT9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.48■■■□□ 2.63
RNPC3Q96LT9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
RNPC3Q96LT9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.46■■■□□ 2.63
RNPC3Q96LT9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.46■■■□□ 2.63
RNPC3Q96LT9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RNPC3Q96LT9 AP006261.1-201ENST00000584783 668 ntBASIC31.41■■■□□ 2.62
RNPC3Q96LT9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.4■■■□□ 2.62
RNPC3Q96LT9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RNPC3Q96LT9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RNPC3Q96LT9 CAHM-201ENST00000604200 896 ntBASIC31.38■■■□□ 2.61
RNPC3Q96LT9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RNPC3Q96LT9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RNPC3Q96LT9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RNPC3Q96LT9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RNPC3Q96LT9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RNPC3Q96LT9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RNPC3Q96LT9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.28■■■□□ 2.6
RNPC3Q96LT9 MIR7108-201ENST00000614319 87 ntBASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms