Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.27■■■□□ 2.76
TIFAQ96CG3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.23■■■□□ 2.75
TIFAQ96CG3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.2■■■□□ 2.75
TIFAQ96CG3 RARRES2P7-201ENST00000567349 469 ntBASIC32.18■■■□□ 2.74
TIFAQ96CG3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
TIFAQ96CG3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
TIFAQ96CG3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
TIFAQ96CG3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
TIFAQ96CG3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
TIFAQ96CG3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
TIFAQ96CG3 AC097358.2-201ENST00000607541 1159 ntBASIC31.99■■■□□ 2.71
TIFAQ96CG3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.99■■■□□ 2.71
TIFAQ96CG3 RPS2P35-201ENST00000443417 897 ntBASIC31.97■■■□□ 2.71
TIFAQ96CG3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.95■■■□□ 2.7
TIFAQ96CG3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.85■■■□□ 2.69
TIFAQ96CG3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TIFAQ96CG3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TIFAQ96CG3 AC136428.2-201ENST00000563187 214 ntBASIC31.83■■■□□ 2.69
TIFAQ96CG3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
TIFAQ96CG3 SUZ12P1-203ENST00000578195 985 ntBASIC31.79■■■□□ 2.68
TIFAQ96CG3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
TIFAQ96CG3 SETD8P1-201ENST00000623146 1180 ntBASIC31.77■■■□□ 2.68
TIFAQ96CG3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.76■■■□□ 2.67
TIFAQ96CG3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TIFAQ96CG3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
TIFAQ96CG3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TIFAQ96CG3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TIFAQ96CG3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
TIFAQ96CG3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.66■■■□□ 2.66
TIFAQ96CG3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TIFAQ96CG3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TIFAQ96CG3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.62■■■□□ 2.65
TIFAQ96CG3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.57■■■□□ 2.64
TIFAQ96CG3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TIFAQ96CG3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.55■■■□□ 2.64
TIFAQ96CG3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.55■■■□□ 2.64
TIFAQ96CG3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TIFAQ96CG3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
TIFAQ96CG3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TIFAQ96CG3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TIFAQ96CG3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.49■■■□□ 2.63
TIFAQ96CG3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TIFAQ96CG3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.48■■■□□ 2.63
TIFAQ96CG3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.46■■■□□ 2.63
TIFAQ96CG3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
TIFAQ96CG3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.44■■■□□ 2.62
TIFAQ96CG3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TIFAQ96CG3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.37■■■□□ 2.61
TIFAQ96CG3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.34■■■□□ 2.61
TIFAQ96CG3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.33■■■□□ 2.61
TIFAQ96CG3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.32■■■□□ 2.6
TIFAQ96CG3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TIFAQ96CG3 AL162393.1-201ENST00000437852 946 ntBASIC31.29■■■□□ 2.6
TIFAQ96CG3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TIFAQ96CG3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.27■■■□□ 2.6
TIFAQ96CG3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
TIFAQ96CG3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
TIFAQ96CG3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.26■■■□□ 2.59
TIFAQ96CG3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TIFAQ96CG3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TIFAQ96CG3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
TIFAQ96CG3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.25■■■□□ 2.59
TIFAQ96CG3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.24■■■□□ 2.59
TIFAQ96CG3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
TIFAQ96CG3 AP006261.1-201ENST00000584783 668 ntBASIC31.18■■■□□ 2.58
TIFAQ96CG3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.18■■■□□ 2.58
TIFAQ96CG3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TIFAQ96CG3 CAHM-201ENST00000604200 896 ntBASIC31.13■■■□□ 2.57
TIFAQ96CG3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
TIFAQ96CG3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TIFAQ96CG3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TIFAQ96CG3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TIFAQ96CG3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TIFAQ96CG3 MIR7108-201ENST00000614319 87 ntBASIC31.07■■■□□ 2.56
TIFAQ96CG3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
TIFAQ96CG3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.03■■■□□ 2.56
TIFAQ96CG3 ABHD17AP4-201ENST00000411545 909 ntBASIC30.99■■■□□ 2.55
TIFAQ96CG3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.99■■■□□ 2.55
TIFAQ96CG3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.99■■■□□ 2.55
TIFAQ96CG3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
TIFAQ96CG3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TIFAQ96CG3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TIFAQ96CG3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
TIFAQ96CG3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
TIFAQ96CG3 AL391121.1-201ENST00000607967 1349 ntBASIC30.93■■■□□ 2.54
TIFAQ96CG3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.92■■■□□ 2.54
TIFAQ96CG3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.91■■■□□ 2.54
TIFAQ96CG3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TIFAQ96CG3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
TIFAQ96CG3 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.88■■■□□ 2.53
TIFAQ96CG3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
TIFAQ96CG3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
TIFAQ96CG3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TIFAQ96CG3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.86■■■□□ 2.53
TIFAQ96CG3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
TIFAQ96CG3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.81■■■□□ 2.52
TIFAQ96CG3 HLA-V-202ENST00000446817 847 ntBASIC30.8■■■□□ 2.52
TIFAQ96CG3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.8■■■□□ 2.52
TIFAQ96CG3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
TIFAQ96CG3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms