Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Chrna3Q8R4G9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Chrna3Q8R4G9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Chrna3Q8R4G9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Chrna3Q8R4G9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Chrna3Q8R4G9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.29■■□□□ 1.96
Chrna3Q8R4G9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Chrna3Q8R4G9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Chrna3Q8R4G9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Chrna3Q8R4G9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.18■■□□□ 1.94
Chrna3Q8R4G9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Chrna3Q8R4G9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.18■■□□□ 1.94
Chrna3Q8R4G9 Gm26115-201ENSMUST00000175605 87 ntBASIC27.16■■□□□ 1.94
Chrna3Q8R4G9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Chrna3Q8R4G9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Chrna3Q8R4G9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Chrna3Q8R4G9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Chrna3Q8R4G9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Chrna3Q8R4G9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Chrna3Q8R4G9 Gm8109-201ENSMUST00000194076 746 ntBASIC27.01■■□□□ 1.91
Chrna3Q8R4G9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Chrna3Q8R4G9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Chrna3Q8R4G9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.91■■□□□ 1.9
Chrna3Q8R4G9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.89■■□□□ 1.9
Chrna3Q8R4G9 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.88■■□□□ 1.89
Chrna3Q8R4G9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Chrna3Q8R4G9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Chrna3Q8R4G9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Chrna3Q8R4G9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
Chrna3Q8R4G9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Chrna3Q8R4G9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Chrna3Q8R4G9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Chrna3Q8R4G9 Gm27322-201ENSMUST00000184007 104 ntBASIC26.76■■□□□ 1.87
Chrna3Q8R4G9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chrna3Q8R4G9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Chrna3Q8R4G9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chrna3Q8R4G9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Chrna3Q8R4G9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chrna3Q8R4G9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.68■■□□□ 1.86
Chrna3Q8R4G9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Chrna3Q8R4G9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Chrna3Q8R4G9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Chrna3Q8R4G9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Chrna3Q8R4G9 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.6■■□□□ 1.85
Chrna3Q8R4G9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.59■■□□□ 1.85
Chrna3Q8R4G9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Chrna3Q8R4G9 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.54■■□□□ 1.84
Chrna3Q8R4G9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Chrna3Q8R4G9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Chrna3Q8R4G9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.53■■□□□ 1.84
Chrna3Q8R4G9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Chrna3Q8R4G9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Chrna3Q8R4G9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Chrna3Q8R4G9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Chrna3Q8R4G9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Chrna3Q8R4G9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Chrna3Q8R4G9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.36■■□□□ 1.81
Chrna3Q8R4G9 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.35■■□□□ 1.81
Chrna3Q8R4G9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Chrna3Q8R4G9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Chrna3Q8R4G9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Chrna3Q8R4G9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Chrna3Q8R4G9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Chrna3Q8R4G9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.22■■□□□ 1.79
Chrna3Q8R4G9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Chrna3Q8R4G9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Chrna3Q8R4G9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Chrna3Q8R4G9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Chrna3Q8R4G9 Gm24804-201ENSMUST00000174982 85 ntBASIC26.19■■□□□ 1.78
Chrna3Q8R4G9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Chrna3Q8R4G9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Chrna3Q8R4G9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Chrna3Q8R4G9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Chrna3Q8R4G9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Chrna3Q8R4G9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Chrna3Q8R4G9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Chrna3Q8R4G9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Chrna3Q8R4G9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.09■■□□□ 1.77
Chrna3Q8R4G9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Chrna3Q8R4G9 Mipep-204ENSMUST00000225043 1548 ntBASIC26.09■■□□□ 1.77
Chrna3Q8R4G9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Chrna3Q8R4G9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Chrna3Q8R4G9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chrna3Q8R4G9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Chrna3Q8R4G9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Chrna3Q8R4G9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Chrna3Q8R4G9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Chrna3Q8R4G9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Chrna3Q8R4G9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Chrna3Q8R4G9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Chrna3Q8R4G9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Chrna3Q8R4G9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Chrna3Q8R4G9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Chrna3Q8R4G9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Chrna3Q8R4G9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Chrna3Q8R4G9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Chrna3Q8R4G9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chrna3Q8R4G9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Chrna3Q8R4G9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Chrna3Q8R4G9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms