Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC46.63■■■■■ 5.06
CFAP43Q8NDM7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC46.63■■■■■ 5.06
CFAP43Q8NDM7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC46.61■■■■■ 5.05
CFAP43Q8NDM7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC46.6■■■■■ 5.05
CFAP43Q8NDM7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC46.57■■■■■ 5.05
CFAP43Q8NDM7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC46.53■■■■■ 5.04
CFAP43Q8NDM7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC46.52■■■■■ 5.04
CFAP43Q8NDM7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC46.52■■■■■ 5.04
CFAP43Q8NDM7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC46.52■■■■■ 5.04
CFAP43Q8NDM7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC46.49■■■■■ 5.03
CFAP43Q8NDM7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC46.45■■■■■ 5.03
CFAP43Q8NDM7 AL031258.1-201ENST00000623562 325 ntBASIC46.45■■■■■ 5.03
CFAP43Q8NDM7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC46.42■■■■■ 5.02
CFAP43Q8NDM7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC46.39■■■■■ 5.02
CFAP43Q8NDM7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC46.37■■■■■ 5.01
CFAP43Q8NDM7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC46.36■■■■■ 5.01
CFAP43Q8NDM7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC46.36■■■■■ 5.01
CFAP43Q8NDM7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC46.25■■■■■ 4.99
CFAP43Q8NDM7 RARRES2P7-201ENST00000567349 469 ntBASIC46.23■■■■■ 4.99
CFAP43Q8NDM7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC46.22■■■■■ 4.99
CFAP43Q8NDM7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC46.2■■■■■ 4.99
CFAP43Q8NDM7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC46.03■■■■■ 4.96
CFAP43Q8NDM7 AC136428.2-201ENST00000563187 214 ntBASIC46.01■■■■■ 4.96
CFAP43Q8NDM7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC45.95■■■■■ 4.95
CFAP43Q8NDM7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC45.95■■■■■ 4.95
CFAP43Q8NDM7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC45.9■■■■■ 4.94
CFAP43Q8NDM7 SUZ12P1-203ENST00000578195 985 ntBASIC45.88■■■■■ 4.93
CFAP43Q8NDM7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC45.84■■■■■ 4.93
CFAP43Q8NDM7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC45.83■■■■■ 4.93
CFAP43Q8NDM7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC45.83■■■■■ 4.93
CFAP43Q8NDM7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC45.83■■■■■ 4.93
CFAP43Q8NDM7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC45.81■■■■■ 4.92
CFAP43Q8NDM7 AC097358.2-201ENST00000607541 1159 ntBASIC45.81■■■■■ 4.92
CFAP43Q8NDM7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC45.78■■■■■ 4.92
CFAP43Q8NDM7 RPS2P35-201ENST00000443417 897 ntBASIC45.75■■■■■ 4.91
CFAP43Q8NDM7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC45.73■■■■■ 4.91
CFAP43Q8NDM7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC45.72■■■■■ 4.91
CFAP43Q8NDM7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC45.72■■■■■ 4.91
CFAP43Q8NDM7 SETD8P1-201ENST00000623146 1180 ntBASIC45.69■■■■■ 4.9
CFAP43Q8NDM7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC45.67■■■■■ 4.9
CFAP43Q8NDM7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC45.65■■■■■ 4.9
CFAP43Q8NDM7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC45.63■■■■■ 4.9
CFAP43Q8NDM7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC45.57■■■■■ 4.89
CFAP43Q8NDM7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC45.56■■■■■ 4.88
CFAP43Q8NDM7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC45.53■■■■■ 4.88
CFAP43Q8NDM7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC45.53■■■■■ 4.88
CFAP43Q8NDM7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC45.47■■■■■ 4.87
CFAP43Q8NDM7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC45.47■■■■■ 4.87
CFAP43Q8NDM7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC45.47■■■■■ 4.87
CFAP43Q8NDM7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC45.43■■■■■ 4.86
CFAP43Q8NDM7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC45.43■■■■■ 4.86
CFAP43Q8NDM7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC45.41■■■■■ 4.86
CFAP43Q8NDM7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC45.39■■■■■ 4.86
CFAP43Q8NDM7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC45.38■■■■■ 4.86
CFAP43Q8NDM7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC45.37■■■■■ 4.85
CFAP43Q8NDM7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC45.33■■■■■ 4.85
CFAP43Q8NDM7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC45.31■■■■■ 4.84
CFAP43Q8NDM7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC45.31■■■■■ 4.84
CFAP43Q8NDM7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC45.3■■■■■ 4.84
CFAP43Q8NDM7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC45.3■■■■■ 4.84
CFAP43Q8NDM7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC45.25■■■■■ 4.83
CFAP43Q8NDM7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC45.25■■■■■ 4.83
CFAP43Q8NDM7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC45.24■■■■■ 4.83
CFAP43Q8NDM7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC45.19■■■■■ 4.83
CFAP43Q8NDM7 AL162393.1-201ENST00000437852 946 ntBASIC45.18■■■■■ 4.82
CFAP43Q8NDM7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC45.18■■■■■ 4.82
CFAP43Q8NDM7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC45.16■■■■■ 4.82
CFAP43Q8NDM7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC45.15■■■■■ 4.82
CFAP43Q8NDM7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC45.12■■■■■ 4.81
CFAP43Q8NDM7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC45.12■■■■■ 4.81
CFAP43Q8NDM7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC45.1■■■■■ 4.81
CFAP43Q8NDM7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC45.07■■■■■ 4.81
CFAP43Q8NDM7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC45.07■■■■■ 4.81
CFAP43Q8NDM7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC45.05■■■■■ 4.8
CFAP43Q8NDM7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC45.01■■■■■ 4.8
CFAP43Q8NDM7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC45■■■■■ 4.79
CFAP43Q8NDM7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC44.99■■■■■ 4.79
CFAP43Q8NDM7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC44.99■■■■■ 4.79
CFAP43Q8NDM7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC44.98■■■■■ 4.79
CFAP43Q8NDM7 AC145285.7-201ENST00000614819 1539 ntBASIC44.94■■■■■ 4.78
CFAP43Q8NDM7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC44.9■■■■■ 4.78
CFAP43Q8NDM7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC44.89■■■■■ 4.78
CFAP43Q8NDM7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC44.88■■■■■ 4.78
CFAP43Q8NDM7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC44.85■■■■■ 4.77
CFAP43Q8NDM7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC44.85■■■■■ 4.77
CFAP43Q8NDM7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC44.8■■■■■ 4.76
CFAP43Q8NDM7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC44.78■■■■■ 4.76
CFAP43Q8NDM7 AP006261.1-201ENST00000584783 668 ntBASIC44.77■■■■■ 4.76
CFAP43Q8NDM7 CAHM-201ENST00000604200 896 ntBASIC44.75■■■■■ 4.75
CFAP43Q8NDM7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC44.75■■■■■ 4.75
CFAP43Q8NDM7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC44.72■■■■■ 4.75
CFAP43Q8NDM7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC44.72■■■■■ 4.75
CFAP43Q8NDM7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC44.71■■■■■ 4.75
CFAP43Q8NDM7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC44.71■■■■■ 4.75
CFAP43Q8NDM7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC44.7■■■■■ 4.75
CFAP43Q8NDM7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC44.7■■■■■ 4.75
CFAP43Q8NDM7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC44.7■■■■■ 4.75
CFAP43Q8NDM7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC44.68■■■■■ 4.74
CFAP43Q8NDM7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC44.67■■■■■ 4.74
CFAP43Q8NDM7 HNRNPLP2-201ENST00000568980 1570 ntBASIC44.65■■■■■ 4.74
Retrieved 100 of 98,524 protein–RNA pairs in 493.5 ms