Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
RAB42Q8N4Z0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RAB42Q8N4Z0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.96■■■□□ 2.07
RAB42Q8N4Z0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
RAB42Q8N4Z0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
RAB42Q8N4Z0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC27.93■■■□□ 2.06
RAB42Q8N4Z0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
RAB42Q8N4Z0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
RAB42Q8N4Z0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
RAB42Q8N4Z0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RAB42Q8N4Z0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
RAB42Q8N4Z0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.87■■■□□ 2.05
RAB42Q8N4Z0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RAB42Q8N4Z0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RAB42Q8N4Z0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RAB42Q8N4Z0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
RAB42Q8N4Z0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RAB42Q8N4Z0 AP002365.1-201ENST00000603448 772 ntBASIC27.83■■■□□ 2.05
RAB42Q8N4Z0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
RAB42Q8N4Z0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RAB42Q8N4Z0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
RAB42Q8N4Z0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.8■■■□□ 2.04
RAB42Q8N4Z0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.74■■■□□ 2.03
RAB42Q8N4Z0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.71■■■□□ 2.03
RAB42Q8N4Z0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
RAB42Q8N4Z0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RAB42Q8N4Z0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RAB42Q8N4Z0 DYNLL1-208ENST00000550178 581 ntBASIC27.67■■■□□ 2.02
RAB42Q8N4Z0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.67■■■□□ 2.02
RAB42Q8N4Z0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAB42Q8N4Z0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
RAB42Q8N4Z0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.66■■■□□ 2.02
RAB42Q8N4Z0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
RAB42Q8N4Z0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.65■■■□□ 2.02
RAB42Q8N4Z0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RAB42Q8N4Z0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RAB42Q8N4Z0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.59■■■□□ 2.01
RAB42Q8N4Z0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
RAB42Q8N4Z0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.55■■■□□ 2
RAB42Q8N4Z0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.55■■■□□ 2
RAB42Q8N4Z0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.55■■■□□ 2
RAB42Q8N4Z0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
RAB42Q8N4Z0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
RAB42Q8N4Z0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.54■■■□□ 2
RAB42Q8N4Z0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
RAB42Q8N4Z0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.51■■□□□ 1.99
RAB42Q8N4Z0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RAB42Q8N4Z0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.5■■□□□ 1.99
RAB42Q8N4Z0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
RAB42Q8N4Z0 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.46■■□□□ 1.99
RAB42Q8N4Z0 AL031258.1-201ENST00000623562 325 ntBASIC27.46■■□□□ 1.99
RAB42Q8N4Z0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
RAB42Q8N4Z0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
RAB42Q8N4Z0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RAB42Q8N4Z0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.41■■□□□ 1.98
RAB42Q8N4Z0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
RAB42Q8N4Z0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RAB42Q8N4Z0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RAB42Q8N4Z0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
RAB42Q8N4Z0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAB42Q8N4Z0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RAB42Q8N4Z0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAB42Q8N4Z0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.32■■□□□ 1.96
RAB42Q8N4Z0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RAB42Q8N4Z0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
RAB42Q8N4Z0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RAB42Q8N4Z0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
RAB42Q8N4Z0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.27■■□□□ 1.96
RAB42Q8N4Z0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.27■■□□□ 1.96
RAB42Q8N4Z0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.27■■□□□ 1.96
RAB42Q8N4Z0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RAB42Q8N4Z0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.25■■□□□ 1.95
RAB42Q8N4Z0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAB42Q8N4Z0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.24■■□□□ 1.95
RAB42Q8N4Z0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.24■■□□□ 1.95
RAB42Q8N4Z0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RAB42Q8N4Z0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RAB42Q8N4Z0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC27.21■■□□□ 1.95
RAB42Q8N4Z0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC27.21■■□□□ 1.95
RAB42Q8N4Z0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RAB42Q8N4Z0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RAB42Q8N4Z0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
RAB42Q8N4Z0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
RAB42Q8N4Z0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
RAB42Q8N4Z0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.14■■□□□ 1.94
RAB42Q8N4Z0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RAB42Q8N4Z0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAB42Q8N4Z0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
RAB42Q8N4Z0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.1■■□□□ 1.93
RAB42Q8N4Z0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RAB42Q8N4Z0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RAB42Q8N4Z0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RAB42Q8N4Z0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.07■■□□□ 1.92
RAB42Q8N4Z0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RAB42Q8N4Z0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RAB42Q8N4Z0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.05■■□□□ 1.92
RAB42Q8N4Z0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RAB42Q8N4Z0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.03■■□□□ 1.92
RAB42Q8N4Z0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RAB42Q8N4Z0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms