Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Rab21-202ENSMUST00000218831 843 ntBASIC26.87■■□□□ 1.89
Trnt1Q8K1J6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.85■■□□□ 1.89
Trnt1Q8K1J6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Trnt1Q8K1J6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trnt1Q8K1J6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
Trnt1Q8K1J6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Trnt1Q8K1J6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trnt1Q8K1J6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Trnt1Q8K1J6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Trnt1Q8K1J6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.71■■□□□ 1.87
Trnt1Q8K1J6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trnt1Q8K1J6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Trnt1Q8K1J6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Trnt1Q8K1J6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trnt1Q8K1J6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trnt1Q8K1J6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trnt1Q8K1J6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Trnt1Q8K1J6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Trnt1Q8K1J6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trnt1Q8K1J6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.49■■□□□ 1.83
Trnt1Q8K1J6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.47■■□□□ 1.83
Trnt1Q8K1J6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.46■■□□□ 1.83
Trnt1Q8K1J6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.46■■□□□ 1.83
Trnt1Q8K1J6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trnt1Q8K1J6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trnt1Q8K1J6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trnt1Q8K1J6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trnt1Q8K1J6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Trnt1Q8K1J6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trnt1Q8K1J6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trnt1Q8K1J6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trnt1Q8K1J6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trnt1Q8K1J6 Gm25262-201ENSMUST00000174934 133 ntBASIC26.36■■□□□ 1.81
Trnt1Q8K1J6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Trnt1Q8K1J6 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.34■■□□□ 1.81
Trnt1Q8K1J6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trnt1Q8K1J6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trnt1Q8K1J6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trnt1Q8K1J6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trnt1Q8K1J6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trnt1Q8K1J6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trnt1Q8K1J6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trnt1Q8K1J6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trnt1Q8K1J6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.13■■□□□ 1.77
Trnt1Q8K1J6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Trnt1Q8K1J6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Trnt1Q8K1J6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trnt1Q8K1J6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Trnt1Q8K1J6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trnt1Q8K1J6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trnt1Q8K1J6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trnt1Q8K1J6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Trnt1Q8K1J6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trnt1Q8K1J6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trnt1Q8K1J6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Trnt1Q8K1J6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Trnt1Q8K1J6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Trnt1Q8K1J6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trnt1Q8K1J6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.9■■□□□ 1.74
Trnt1Q8K1J6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.9■■□□□ 1.74
Trnt1Q8K1J6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Trnt1Q8K1J6 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.86■■□□□ 1.73
Trnt1Q8K1J6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.85■■□□□ 1.73
Trnt1Q8K1J6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Trnt1Q8K1J6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Trnt1Q8K1J6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trnt1Q8K1J6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trnt1Q8K1J6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trnt1Q8K1J6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trnt1Q8K1J6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Trnt1Q8K1J6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trnt1Q8K1J6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Trnt1Q8K1J6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.72■■□□□ 1.71
Trnt1Q8K1J6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Trnt1Q8K1J6 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.7■■□□□ 1.7
Trnt1Q8K1J6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trnt1Q8K1J6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Trnt1Q8K1J6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trnt1Q8K1J6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trnt1Q8K1J6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trnt1Q8K1J6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Trnt1Q8K1J6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trnt1Q8K1J6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.64■■□□□ 1.7
Trnt1Q8K1J6 Mipep-204ENSMUST00000225043 1548 ntBASIC25.64■■□□□ 1.7
Trnt1Q8K1J6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Trnt1Q8K1J6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Trnt1Q8K1J6 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.61■■□□□ 1.69
Trnt1Q8K1J6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Trnt1Q8K1J6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Trnt1Q8K1J6 Gm27322-201ENSMUST00000184007 104 ntBASIC25.6■■□□□ 1.69
Trnt1Q8K1J6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.58■■□□□ 1.69
Trnt1Q8K1J6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.58■■□□□ 1.69
Trnt1Q8K1J6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trnt1Q8K1J6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.53■■□□□ 1.68
Trnt1Q8K1J6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.49■■□□□ 1.67
Trnt1Q8K1J6 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.48■■□□□ 1.67
Trnt1Q8K1J6 Gm26115-201ENSMUST00000175605 87 ntBASIC25.47■■□□□ 1.67
Trnt1Q8K1J6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trnt1Q8K1J6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trnt1Q8K1J6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms