Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.75■■■□□ 2.35
CHPFQ8IZ52 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHPFQ8IZ52 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHPFQ8IZ52 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
CHPFQ8IZ52 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHPFQ8IZ52 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.68■■■□□ 2.34
CHPFQ8IZ52 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CHPFQ8IZ52 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
CHPFQ8IZ52 AL031258.1-201ENST00000623562 325 ntBASIC29.65■■■□□ 2.34
CHPFQ8IZ52 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.59■■■□□ 2.33
CHPFQ8IZ52 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.59■■■□□ 2.33
CHPFQ8IZ52 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.58■■■□□ 2.33
CHPFQ8IZ52 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
CHPFQ8IZ52 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CHPFQ8IZ52 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHPFQ8IZ52 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.47■■■□□ 2.31
CHPFQ8IZ52 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.47■■■□□ 2.31
CHPFQ8IZ52 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHPFQ8IZ52 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHPFQ8IZ52 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHPFQ8IZ52 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHPFQ8IZ52 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.39■■■□□ 2.3
CHPFQ8IZ52 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
CHPFQ8IZ52 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
CHPFQ8IZ52 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.36■■■□□ 2.29
CHPFQ8IZ52 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.35■■■□□ 2.29
CHPFQ8IZ52 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHPFQ8IZ52 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CHPFQ8IZ52 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
CHPFQ8IZ52 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.27■■■□□ 2.28
CHPFQ8IZ52 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CHPFQ8IZ52 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.25■■■□□ 2.27
CHPFQ8IZ52 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.25■■■□□ 2.27
CHPFQ8IZ52 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHPFQ8IZ52 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHPFQ8IZ52 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHPFQ8IZ52 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.22■■■□□ 2.27
CHPFQ8IZ52 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.22■■■□□ 2.27
CHPFQ8IZ52 RARRES2P7-201ENST00000567349 469 ntBASIC29.2■■■□□ 2.26
CHPFQ8IZ52 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CHPFQ8IZ52 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
CHPFQ8IZ52 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
CHPFQ8IZ52 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHPFQ8IZ52 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
CHPFQ8IZ52 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.11■■■□□ 2.25
CHPFQ8IZ52 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CHPFQ8IZ52 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.08■■■□□ 2.25
CHPFQ8IZ52 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.08■■■□□ 2.25
CHPFQ8IZ52 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.06■■■□□ 2.24
CHPFQ8IZ52 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHPFQ8IZ52 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHPFQ8IZ52 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.04■■■□□ 2.24
CHPFQ8IZ52 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.02■■■□□ 2.24
CHPFQ8IZ52 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.01■■■□□ 2.23
CHPFQ8IZ52 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29■■■□□ 2.23
CHPFQ8IZ52 AC145285.7-201ENST00000614819 1539 ntBASIC28.99■■■□□ 2.23
CHPFQ8IZ52 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.99■■■□□ 2.23
CHPFQ8IZ52 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
CHPFQ8IZ52 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.96■■■□□ 2.23
CHPFQ8IZ52 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.95■■■□□ 2.22
CHPFQ8IZ52 AC097358.2-201ENST00000607541 1159 ntBASIC28.94■■■□□ 2.22
CHPFQ8IZ52 SETD8P1-201ENST00000623146 1180 ntBASIC28.94■■■□□ 2.22
CHPFQ8IZ52 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.92■■■□□ 2.22
CHPFQ8IZ52 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.91■■■□□ 2.22
CHPFQ8IZ52 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CHPFQ8IZ52 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CHPFQ8IZ52 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.89■■■□□ 2.22
CHPFQ8IZ52 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.88■■■□□ 2.21
CHPFQ8IZ52 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CHPFQ8IZ52 AC136428.2-201ENST00000563187 214 ntBASIC28.82■■■□□ 2.2
CHPFQ8IZ52 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.81■■■□□ 2.2
CHPFQ8IZ52 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CHPFQ8IZ52 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CHPFQ8IZ52 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
CHPFQ8IZ52 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CHPFQ8IZ52 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.73■■■□□ 2.19
CHPFQ8IZ52 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
CHPFQ8IZ52 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHPFQ8IZ52 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.68■■■□□ 2.18
CHPFQ8IZ52 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHPFQ8IZ52 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHPFQ8IZ52 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.67■■■□□ 2.18
CHPFQ8IZ52 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.67■■■□□ 2.18
CHPFQ8IZ52 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CHPFQ8IZ52 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.66■■■□□ 2.18
CHPFQ8IZ52 SUZ12P1-203ENST00000578195 985 ntBASIC28.64■■■□□ 2.18
CHPFQ8IZ52 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CHPFQ8IZ52 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHPFQ8IZ52 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CHPFQ8IZ52 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CHPFQ8IZ52 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHPFQ8IZ52 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CHPFQ8IZ52 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CHPFQ8IZ52 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.55■■■□□ 2.16
CHPFQ8IZ52 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
CHPFQ8IZ52 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
CHPFQ8IZ52 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHPFQ8IZ52 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CHPFQ8IZ52 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHPFQ8IZ52 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms