Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Rtp1Q8C8C1 Zfp131-205ENSMUST00000223812 663 ntBASIC32.78■■■□□ 2.84
Rtp1Q8C8C1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Rtp1Q8C8C1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Rtp1Q8C8C1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
Rtp1Q8C8C1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Rtp1Q8C8C1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Rtp1Q8C8C1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rtp1Q8C8C1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.55■■■□□ 2.8
Rtp1Q8C8C1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
Rtp1Q8C8C1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Rtp1Q8C8C1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.52■■■□□ 2.8
Rtp1Q8C8C1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Rtp1Q8C8C1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rtp1Q8C8C1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.49■■■□□ 2.79
Rtp1Q8C8C1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Rtp1Q8C8C1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rtp1Q8C8C1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Rtp1Q8C8C1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rtp1Q8C8C1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtp1Q8C8C1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rtp1Q8C8C1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rtp1Q8C8C1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Rtp1Q8C8C1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.32■■■□□ 2.76
Rtp1Q8C8C1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.29■■■□□ 2.76
Rtp1Q8C8C1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Rtp1Q8C8C1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rtp1Q8C8C1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Rtp1Q8C8C1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Rtp1Q8C8C1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rtp1Q8C8C1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
Rtp1Q8C8C1 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.22■■■□□ 2.75
Rtp1Q8C8C1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Rtp1Q8C8C1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Rtp1Q8C8C1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rtp1Q8C8C1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Rtp1Q8C8C1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Rtp1Q8C8C1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Rtp1Q8C8C1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Rtp1Q8C8C1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Rtp1Q8C8C1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Rtp1Q8C8C1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Rtp1Q8C8C1 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.99■■■□□ 2.71
Rtp1Q8C8C1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rtp1Q8C8C1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
Rtp1Q8C8C1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Rtp1Q8C8C1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Rtp1Q8C8C1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.88■■■□□ 2.69
Rtp1Q8C8C1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Rtp1Q8C8C1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Rtp1Q8C8C1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Rtp1Q8C8C1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Rtp1Q8C8C1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.71■■■□□ 2.67
Rtp1Q8C8C1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.7■■■□□ 2.67
Rtp1Q8C8C1 Gm16148-201ENSMUST00000119653 893 ntBASIC31.69■■■□□ 2.66
Rtp1Q8C8C1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.69■■■□□ 2.66
Rtp1Q8C8C1 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.67■■■□□ 2.66
Rtp1Q8C8C1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rtp1Q8C8C1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtp1Q8C8C1 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.66■■■□□ 2.66
Rtp1Q8C8C1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtp1Q8C8C1 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.65■■■□□ 2.66
Rtp1Q8C8C1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Rtp1Q8C8C1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rtp1Q8C8C1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Rtp1Q8C8C1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
Rtp1Q8C8C1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
Rtp1Q8C8C1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
Rtp1Q8C8C1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Rtp1Q8C8C1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rtp1Q8C8C1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rtp1Q8C8C1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.63
Rtp1Q8C8C1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Rtp1Q8C8C1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Rtp1Q8C8C1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Rtp1Q8C8C1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Rtp1Q8C8C1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Rtp1Q8C8C1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.42■■■□□ 2.62
Rtp1Q8C8C1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.41■■■□□ 2.62
Rtp1Q8C8C1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
Rtp1Q8C8C1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rtp1Q8C8C1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Rtp1Q8C8C1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Rtp1Q8C8C1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.33■■■□□ 2.61
Rtp1Q8C8C1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.33■■■□□ 2.61
Rtp1Q8C8C1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Rtp1Q8C8C1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Rtp1Q8C8C1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Rtp1Q8C8C1 Gm45855-201ENSMUST00000212546 880 ntBASIC31.27■■■□□ 2.6
Rtp1Q8C8C1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Rtp1Q8C8C1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rtp1Q8C8C1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rtp1Q8C8C1 Peli2-204ENSMUST00000226513 1320 ntBASIC31.21■■■□□ 2.59
Rtp1Q8C8C1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.2■■■□□ 2.59
Rtp1Q8C8C1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Rtp1Q8C8C1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Rtp1Q8C8C1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Rtp1Q8C8C1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Rtp1Q8C8C1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtp1Q8C8C1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms