Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nhlrc1Q8BR37 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.45■■□□□ 1.02
Nhlrc1Q8BR37 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nhlrc1Q8BR37 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.42■■□□□ 1.02
Nhlrc1Q8BR37 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nhlrc1Q8BR37 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nhlrc1Q8BR37 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Nhlrc1Q8BR37 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.36■■□□□ 1.01
Nhlrc1Q8BR37 Gm27322-201ENSMUST00000184007 104 ntBASIC21.32■■□□□ 1
Nhlrc1Q8BR37 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nhlrc1Q8BR37 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nhlrc1Q8BR37 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Nhlrc1Q8BR37 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nhlrc1Q8BR37 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nhlrc1Q8BR37 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nhlrc1Q8BR37 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.23■□□□□ 0.99
Nhlrc1Q8BR37 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nhlrc1Q8BR37 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nhlrc1Q8BR37 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nhlrc1Q8BR37 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nhlrc1Q8BR37 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nhlrc1Q8BR37 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nhlrc1Q8BR37 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.08■□□□□ 0.97
Nhlrc1Q8BR37 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.07■□□□□ 0.96
Nhlrc1Q8BR37 Gm24804-201ENSMUST00000174982 85 ntBASIC21.05■□□□□ 0.96
Nhlrc1Q8BR37 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nhlrc1Q8BR37 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nhlrc1Q8BR37 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nhlrc1Q8BR37 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nhlrc1Q8BR37 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.97■□□□□ 0.95
Nhlrc1Q8BR37 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.96■□□□□ 0.95
Nhlrc1Q8BR37 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nhlrc1Q8BR37 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nhlrc1Q8BR37 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Nhlrc1Q8BR37 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nhlrc1Q8BR37 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Nhlrc1Q8BR37 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.85■□□□□ 0.93
Nhlrc1Q8BR37 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nhlrc1Q8BR37 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhlrc1Q8BR37 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.8■□□□□ 0.92
Nhlrc1Q8BR37 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nhlrc1Q8BR37 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nhlrc1Q8BR37 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.79■□□□□ 0.92
Nhlrc1Q8BR37 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhlrc1Q8BR37 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhlrc1Q8BR37 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nhlrc1Q8BR37 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhlrc1Q8BR37 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nhlrc1Q8BR37 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nhlrc1Q8BR37 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nhlrc1Q8BR37 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nhlrc1Q8BR37 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nhlrc1Q8BR37 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nhlrc1Q8BR37 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nhlrc1Q8BR37 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nhlrc1Q8BR37 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nhlrc1Q8BR37 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nhlrc1Q8BR37 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Nhlrc1Q8BR37 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nhlrc1Q8BR37 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nhlrc1Q8BR37 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nhlrc1Q8BR37 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nhlrc1Q8BR37 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.57■□□□□ 0.88
Nhlrc1Q8BR37 Zfp131-205ENSMUST00000223812 663 ntBASIC20.57■□□□□ 0.88
Nhlrc1Q8BR37 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.57■□□□□ 0.88
Nhlrc1Q8BR37 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlrc1Q8BR37 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlrc1Q8BR37 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlrc1Q8BR37 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nhlrc1Q8BR37 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nhlrc1Q8BR37 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nhlrc1Q8BR37 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nhlrc1Q8BR37 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nhlrc1Q8BR37 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nhlrc1Q8BR37 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nhlrc1Q8BR37 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nhlrc1Q8BR37 Gm16148-201ENSMUST00000119653 893 ntBASIC20.43■□□□□ 0.86
Nhlrc1Q8BR37 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nhlrc1Q8BR37 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhlrc1Q8BR37 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nhlrc1Q8BR37 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nhlrc1Q8BR37 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nhlrc1Q8BR37 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nhlrc1Q8BR37 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.38■□□□□ 0.85
Nhlrc1Q8BR37 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nhlrc1Q8BR37 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nhlrc1Q8BR37 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.36■□□□□ 0.85
Nhlrc1Q8BR37 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nhlrc1Q8BR37 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Nhlrc1Q8BR37 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.34■□□□□ 0.85
Nhlrc1Q8BR37 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nhlrc1Q8BR37 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nhlrc1Q8BR37 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nhlrc1Q8BR37 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.33■□□□□ 0.85
Nhlrc1Q8BR37 Peli2-204ENSMUST00000226513 1320 ntBASIC20.32■□□□□ 0.84
Nhlrc1Q8BR37 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nhlrc1Q8BR37 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nhlrc1Q8BR37 Mipep-204ENSMUST00000225043 1548 ntBASIC20.29■□□□□ 0.84
Nhlrc1Q8BR37 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nhlrc1Q8BR37 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms