Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
Nop53Q8BK35 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Nop53Q8BK35 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Nop53Q8BK35 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Nop53Q8BK35 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Nop53Q8BK35 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.15■■■□□ 2.26
Nop53Q8BK35 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.14■■■□□ 2.26
Nop53Q8BK35 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.14■■■□□ 2.26
Nop53Q8BK35 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Nop53Q8BK35 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
Nop53Q8BK35 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Nop53Q8BK35 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Nop53Q8BK35 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Nop53Q8BK35 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.04■■■□□ 2.24
Nop53Q8BK35 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.91■■■□□ 2.22
Nop53Q8BK35 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
Nop53Q8BK35 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.2
Nop53Q8BK35 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Nop53Q8BK35 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Nop53Q8BK35 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Nop53Q8BK35 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Nop53Q8BK35 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.75■■■□□ 2.19
Nop53Q8BK35 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Nop53Q8BK35 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.74■■■□□ 2.19
Nop53Q8BK35 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Nop53Q8BK35 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.72■■■□□ 2.19
Nop53Q8BK35 Gm25262-201ENSMUST00000174934 133 ntBASIC28.71■■■□□ 2.19
Nop53Q8BK35 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Nop53Q8BK35 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Nop53Q8BK35 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Nop53Q8BK35 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.62■■■□□ 2.17
Nop53Q8BK35 Rab21-202ENSMUST00000218831 843 ntBASIC28.6■■■□□ 2.17
Nop53Q8BK35 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Nop53Q8BK35 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Nop53Q8BK35 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Nop53Q8BK35 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Nop53Q8BK35 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.5■■■□□ 2.15
Nop53Q8BK35 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.49■■■□□ 2.15
Nop53Q8BK35 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Nop53Q8BK35 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Nop53Q8BK35 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Nop53Q8BK35 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.4■■■□□ 2.14
Nop53Q8BK35 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Nop53Q8BK35 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Nop53Q8BK35 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.34■■■□□ 2.13
Nop53Q8BK35 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Nop53Q8BK35 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Nop53Q8BK35 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.33■■■□□ 2.13
Nop53Q8BK35 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.33■■■□□ 2.12
Nop53Q8BK35 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Nop53Q8BK35 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Nop53Q8BK35 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Nop53Q8BK35 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
Nop53Q8BK35 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Nop53Q8BK35 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Nop53Q8BK35 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.22■■■□□ 2.11
Nop53Q8BK35 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Nop53Q8BK35 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.19■■■□□ 2.1
Nop53Q8BK35 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Nop53Q8BK35 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Nop53Q8BK35 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Nop53Q8BK35 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Nop53Q8BK35 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Nop53Q8BK35 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Nop53Q8BK35 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Nop53Q8BK35 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Nop53Q8BK35 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.13■■■□□ 2.09
Nop53Q8BK35 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Nop53Q8BK35 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Nop53Q8BK35 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Nop53Q8BK35 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Nop53Q8BK35 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Nop53Q8BK35 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Nop53Q8BK35 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Nop53Q8BK35 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Nop53Q8BK35 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Nop53Q8BK35 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.08■■■□□ 2.08
Nop53Q8BK35 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Nop53Q8BK35 Gm26115-201ENSMUST00000175605 87 ntBASIC27.99■■■□□ 2.07
Nop53Q8BK35 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Nop53Q8BK35 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Nop53Q8BK35 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Nop53Q8BK35 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Nop53Q8BK35 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.91■■■□□ 2.06
Nop53Q8BK35 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.9■■■□□ 2.06
Nop53Q8BK35 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Nop53Q8BK35 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.86■■■□□ 2.05
Nop53Q8BK35 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.85■■■□□ 2.05
Nop53Q8BK35 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Nop53Q8BK35 Gm8109-201ENSMUST00000194076 746 ntBASIC27.82■■■□□ 2.04
Nop53Q8BK35 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Nop53Q8BK35 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
Nop53Q8BK35 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Nop53Q8BK35 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.77■■■□□ 2.04
Nop53Q8BK35 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Nop53Q8BK35 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Nop53Q8BK35 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Nop53Q8BK35 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Nop53Q8BK35 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Nop53Q8BK35 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms