Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Skida1Q80YR3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Skida1Q80YR3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.4■■□□□ 1.82
Skida1Q80YR3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.39■■□□□ 1.82
Skida1Q80YR3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Skida1Q80YR3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Skida1Q80YR3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Skida1Q80YR3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Skida1Q80YR3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Skida1Q80YR3 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC26.28■■□□□ 1.8
Skida1Q80YR3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.24■■□□□ 1.79
Skida1Q80YR3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Skida1Q80YR3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Skida1Q80YR3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Skida1Q80YR3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Skida1Q80YR3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Skida1Q80YR3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Skida1Q80YR3 Zfp131-205ENSMUST00000223812 663 ntBASIC26.11■■□□□ 1.77
Skida1Q80YR3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Skida1Q80YR3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Skida1Q80YR3 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Skida1Q80YR3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Skida1Q80YR3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Skida1Q80YR3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.05■■□□□ 1.76
Skida1Q80YR3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Skida1Q80YR3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Skida1Q80YR3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Skida1Q80YR3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Skida1Q80YR3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Skida1Q80YR3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Skida1Q80YR3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
Skida1Q80YR3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.92■■□□□ 1.74
Skida1Q80YR3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Skida1Q80YR3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.91■■□□□ 1.74
Skida1Q80YR3 Gm37444-201ENSMUST00000193605 439 ntBASIC25.91■■□□□ 1.74
Skida1Q80YR3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Skida1Q80YR3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Skida1Q80YR3 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Skida1Q80YR3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Skida1Q80YR3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Skida1Q80YR3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Skida1Q80YR3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.77■■□□□ 1.72
Skida1Q80YR3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.77■■□□□ 1.72
Skida1Q80YR3 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.77■■□□□ 1.72
Skida1Q80YR3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Skida1Q80YR3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Skida1Q80YR3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Skida1Q80YR3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Skida1Q80YR3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.74■■□□□ 1.71
Skida1Q80YR3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Skida1Q80YR3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Skida1Q80YR3 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.72■■□□□ 1.71
Skida1Q80YR3 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.71■■□□□ 1.71
Skida1Q80YR3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Skida1Q80YR3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Skida1Q80YR3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Skida1Q80YR3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Skida1Q80YR3 Gm42790-201ENSMUST00000201268 969 ntBASIC25.67■■□□□ 1.7
Skida1Q80YR3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Skida1Q80YR3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Skida1Q80YR3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Skida1Q80YR3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Skida1Q80YR3 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.55■■□□□ 1.68
Skida1Q80YR3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Skida1Q80YR3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Skida1Q80YR3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Skida1Q80YR3 Gm16148-201ENSMUST00000119653 893 ntBASIC25.48■■□□□ 1.67
Skida1Q80YR3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Skida1Q80YR3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Skida1Q80YR3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Skida1Q80YR3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
Skida1Q80YR3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Skida1Q80YR3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Skida1Q80YR3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Skida1Q80YR3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.4■■□□□ 1.66
Skida1Q80YR3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.39■■□□□ 1.66
Skida1Q80YR3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Skida1Q80YR3 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC25.38■■□□□ 1.65
Skida1Q80YR3 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.38■■□□□ 1.65
Skida1Q80YR3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Skida1Q80YR3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Skida1Q80YR3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Skida1Q80YR3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Skida1Q80YR3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Skida1Q80YR3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Skida1Q80YR3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Skida1Q80YR3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.29■■□□□ 1.64
Skida1Q80YR3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Skida1Q80YR3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
Skida1Q80YR3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.25■■□□□ 1.63
Skida1Q80YR3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.23■■□□□ 1.63
Skida1Q80YR3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Skida1Q80YR3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Skida1Q80YR3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Skida1Q80YR3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.16■■□□□ 1.62
Skida1Q80YR3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Skida1Q80YR3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.15■■□□□ 1.62
Skida1Q80YR3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Skida1Q80YR3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Skida1Q80YR3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms