Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.31■■■□□ 2.6
DCLRE1AQ6PJP8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
DCLRE1AQ6PJP8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
DCLRE1AQ6PJP8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
DCLRE1AQ6PJP8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
DCLRE1AQ6PJP8 AL031258.1-201ENST00000623562 325 ntBASIC31.19■■■□□ 2.58
DCLRE1AQ6PJP8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
DCLRE1AQ6PJP8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
DCLRE1AQ6PJP8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
DCLRE1AQ6PJP8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.13■■■□□ 2.57
DCLRE1AQ6PJP8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
DCLRE1AQ6PJP8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
DCLRE1AQ6PJP8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.06■■■□□ 2.56
DCLRE1AQ6PJP8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.05■■■□□ 2.56
DCLRE1AQ6PJP8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
DCLRE1AQ6PJP8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
DCLRE1AQ6PJP8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
DCLRE1AQ6PJP8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.99■■■□□ 2.55
DCLRE1AQ6PJP8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
DCLRE1AQ6PJP8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.96■■■□□ 2.55
DCLRE1AQ6PJP8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
DCLRE1AQ6PJP8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
DCLRE1AQ6PJP8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.89■■■□□ 2.54
DCLRE1AQ6PJP8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.89■■■□□ 2.54
DCLRE1AQ6PJP8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
DCLRE1AQ6PJP8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.87■■■□□ 2.53
DCLRE1AQ6PJP8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
DCLRE1AQ6PJP8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
DCLRE1AQ6PJP8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.85■■■□□ 2.53
DCLRE1AQ6PJP8 AC145285.7-201ENST00000614819 1539 ntBASIC30.83■■■□□ 2.53
DCLRE1AQ6PJP8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
DCLRE1AQ6PJP8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
DCLRE1AQ6PJP8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.81■■■□□ 2.52
DCLRE1AQ6PJP8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
DCLRE1AQ6PJP8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.77■■■□□ 2.52
DCLRE1AQ6PJP8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.76■■■□□ 2.51
DCLRE1AQ6PJP8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
DCLRE1AQ6PJP8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.71■■■□□ 2.51
DCLRE1AQ6PJP8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
DCLRE1AQ6PJP8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.7■■■□□ 2.51
DCLRE1AQ6PJP8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
DCLRE1AQ6PJP8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
DCLRE1AQ6PJP8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
DCLRE1AQ6PJP8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
DCLRE1AQ6PJP8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
DCLRE1AQ6PJP8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.59■■■□□ 2.49
DCLRE1AQ6PJP8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
DCLRE1AQ6PJP8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
DCLRE1AQ6PJP8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
DCLRE1AQ6PJP8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
DCLRE1AQ6PJP8 RARRES2P7-201ENST00000567349 469 ntBASIC30.55■■■□□ 2.48
DCLRE1AQ6PJP8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
DCLRE1AQ6PJP8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
DCLRE1AQ6PJP8 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.54■■■□□ 2.48
DCLRE1AQ6PJP8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.54■■■□□ 2.48
DCLRE1AQ6PJP8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.5■■■□□ 2.47
DCLRE1AQ6PJP8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
DCLRE1AQ6PJP8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
DCLRE1AQ6PJP8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.48■■■□□ 2.47
DCLRE1AQ6PJP8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
DCLRE1AQ6PJP8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.44■■■□□ 2.46
DCLRE1AQ6PJP8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
DCLRE1AQ6PJP8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.43■■■□□ 2.46
DCLRE1AQ6PJP8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.43■■■□□ 2.46
DCLRE1AQ6PJP8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.41■■■□□ 2.46
DCLRE1AQ6PJP8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
DCLRE1AQ6PJP8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
DCLRE1AQ6PJP8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
DCLRE1AQ6PJP8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.4■■■□□ 2.46
DCLRE1AQ6PJP8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
DCLRE1AQ6PJP8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
DCLRE1AQ6PJP8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.36■■■□□ 2.45
DCLRE1AQ6PJP8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.35■■■□□ 2.45
DCLRE1AQ6PJP8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.35■■■□□ 2.45
DCLRE1AQ6PJP8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
DCLRE1AQ6PJP8 SETD8P1-201ENST00000623146 1180 ntBASIC30.31■■■□□ 2.44
DCLRE1AQ6PJP8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.31■■■□□ 2.44
DCLRE1AQ6PJP8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
DCLRE1AQ6PJP8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
DCLRE1AQ6PJP8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.28■■■□□ 2.44
DCLRE1AQ6PJP8 AC097358.2-201ENST00000607541 1159 ntBASIC30.28■■■□□ 2.44
DCLRE1AQ6PJP8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
DCLRE1AQ6PJP8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
DCLRE1AQ6PJP8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
DCLRE1AQ6PJP8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
DCLRE1AQ6PJP8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
DCLRE1AQ6PJP8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
DCLRE1AQ6PJP8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
DCLRE1AQ6PJP8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
DCLRE1AQ6PJP8 AC136428.2-201ENST00000563187 214 ntBASIC30.2■■■□□ 2.43
DCLRE1AQ6PJP8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.19■■■□□ 2.42
DCLRE1AQ6PJP8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.17■■■□□ 2.42
DCLRE1AQ6PJP8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
DCLRE1AQ6PJP8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.11■■■□□ 2.41
DCLRE1AQ6PJP8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.11■■■□□ 2.41
DCLRE1AQ6PJP8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
DCLRE1AQ6PJP8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.1■■■□□ 2.41
DCLRE1AQ6PJP8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
DCLRE1AQ6PJP8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.08■■■□□ 2.41
DCLRE1AQ6PJP8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms