Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Foxc1Q61572 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Foxc1Q61572 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Foxc1Q61572 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Foxc1Q61572 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Foxc1Q61572 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.83■□□□□ 0.77
Foxc1Q61572 Gm8109-201ENSMUST00000194076 746 ntBASIC19.83■□□□□ 0.77
Foxc1Q61572 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Foxc1Q61572 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Foxc1Q61572 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Foxc1Q61572 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Foxc1Q61572 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxc1Q61572 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.79■□□□□ 0.76
Foxc1Q61572 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxc1Q61572 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxc1Q61572 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxc1Q61572 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxc1Q61572 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxc1Q61572 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxc1Q61572 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Foxc1Q61572 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.73■□□□□ 0.75
Foxc1Q61572 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Foxc1Q61572 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
Foxc1Q61572 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.69■□□□□ 0.74
Foxc1Q61572 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Foxc1Q61572 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxc1Q61572 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Foxc1Q61572 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Foxc1Q61572 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Foxc1Q61572 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Foxc1Q61572 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Foxc1Q61572 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxc1Q61572 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Foxc1Q61572 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC19.46■□□□□ 0.71
Foxc1Q61572 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxc1Q61572 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Foxc1Q61572 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxc1Q61572 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.41■□□□□ 0.7
Foxc1Q61572 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxc1Q61572 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxc1Q61572 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.4■□□□□ 0.7
Foxc1Q61572 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxc1Q61572 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxc1Q61572 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxc1Q61572 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Foxc1Q61572 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Foxc1Q61572 Gm27322-201ENSMUST00000184007 104 ntBASIC19.35■□□□□ 0.69
Foxc1Q61572 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxc1Q61572 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Foxc1Q61572 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Foxc1Q61572 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.29■□□□□ 0.68
Foxc1Q61572 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxc1Q61572 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.26■□□□□ 0.67
Foxc1Q61572 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Foxc1Q61572 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.22■□□□□ 0.67
Foxc1Q61572 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.2■□□□□ 0.66
Foxc1Q61572 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.19■□□□□ 0.66
Foxc1Q61572 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Foxc1Q61572 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxc1Q61572 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Foxc1Q61572 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Foxc1Q61572 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Foxc1Q61572 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Foxc1Q61572 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Foxc1Q61572 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Foxc1Q61572 Gm24804-201ENSMUST00000174982 85 ntBASIC19.12■□□□□ 0.65
Foxc1Q61572 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Foxc1Q61572 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Foxc1Q61572 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Foxc1Q61572 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Foxc1Q61572 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Foxc1Q61572 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Foxc1Q61572 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.08■□□□□ 0.64
Foxc1Q61572 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.07■□□□□ 0.64
Foxc1Q61572 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Foxc1Q61572 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Foxc1Q61572 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.04■□□□□ 0.64
Foxc1Q61572 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Foxc1Q61572 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Foxc1Q61572 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Foxc1Q61572 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxc1Q61572 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Foxc1Q61572 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Foxc1Q61572 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Foxc1Q61572 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxc1Q61572 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Foxc1Q61572 Mipep-204ENSMUST00000225043 1548 ntBASIC18.9■□□□□ 0.62
Foxc1Q61572 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxc1Q61572 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxc1Q61572 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxc1Q61572 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxc1Q61572 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Foxc1Q61572 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxc1Q61572 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc1Q61572 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc1Q61572 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc1Q61572 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc1Q61572 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxc1Q61572 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxc1Q61572 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms