Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sdf4Q61112 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sdf4Q61112 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Sdf4Q61112 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Sdf4Q61112 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Sdf4Q61112 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Sdf4Q61112 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sdf4Q61112 Gm25262-201ENSMUST00000174934 133 ntBASIC27.93■■■□□ 2.06
Sdf4Q61112 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sdf4Q61112 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sdf4Q61112 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.87■■■□□ 2.05
Sdf4Q61112 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.84■■■□□ 2.05
Sdf4Q61112 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.82■■■□□ 2.04
Sdf4Q61112 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Sdf4Q61112 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sdf4Q61112 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Sdf4Q61112 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sdf4Q61112 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Sdf4Q61112 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sdf4Q61112 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Sdf4Q61112 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Sdf4Q61112 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Sdf4Q61112 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Sdf4Q61112 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sdf4Q61112 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Sdf4Q61112 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
Sdf4Q61112 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Sdf4Q61112 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Sdf4Q61112 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.54■■■□□ 2
Sdf4Q61112 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.52■■■□□ 2
Sdf4Q61112 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.51■■■□□ 2
Sdf4Q61112 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Sdf4Q61112 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Sdf4Q61112 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.47■■□□□ 1.99
Sdf4Q61112 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Sdf4Q61112 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Sdf4Q61112 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.45■■□□□ 1.98
Sdf4Q61112 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Sdf4Q61112 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Sdf4Q61112 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Sdf4Q61112 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.36■■□□□ 1.97
Sdf4Q61112 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.31■■□□□ 1.96
Sdf4Q61112 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.3■■□□□ 1.96
Sdf4Q61112 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Sdf4Q61112 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Sdf4Q61112 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Sdf4Q61112 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Sdf4Q61112 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Sdf4Q61112 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Sdf4Q61112 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Sdf4Q61112 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sdf4Q61112 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sdf4Q61112 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Sdf4Q61112 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Sdf4Q61112 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Sdf4Q61112 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.15■■□□□ 1.94
Sdf4Q61112 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Sdf4Q61112 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.12■■□□□ 1.93
Sdf4Q61112 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sdf4Q61112 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sdf4Q61112 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
Sdf4Q61112 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Sdf4Q61112 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Sdf4Q61112 Gm26115-201ENSMUST00000175605 87 ntBASIC27.03■■□□□ 1.92
Sdf4Q61112 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sdf4Q61112 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
Sdf4Q61112 Gm27322-201ENSMUST00000184007 104 ntBASIC27.02■■□□□ 1.92
Sdf4Q61112 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.01■■□□□ 1.91
Sdf4Q61112 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27■■□□□ 1.91
Sdf4Q61112 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Sdf4Q61112 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Sdf4Q61112 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Sdf4Q61112 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Sdf4Q61112 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
Sdf4Q61112 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Sdf4Q61112 Gm8109-201ENSMUST00000194076 746 ntBASIC26.91■■□□□ 1.9
Sdf4Q61112 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Sdf4Q61112 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Sdf4Q61112 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
Sdf4Q61112 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Sdf4Q61112 Mipep-204ENSMUST00000225043 1548 ntBASIC26.83■■□□□ 1.89
Sdf4Q61112 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Sdf4Q61112 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
Sdf4Q61112 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.82■■□□□ 1.88
Sdf4Q61112 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.82■■□□□ 1.88
Sdf4Q61112 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.88
Sdf4Q61112 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sdf4Q61112 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sdf4Q61112 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Sdf4Q61112 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sdf4Q61112 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sdf4Q61112 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Sdf4Q61112 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.64■■□□□ 1.86
Sdf4Q61112 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Sdf4Q61112 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sdf4Q61112 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.61■■□□□ 1.85
Sdf4Q61112 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Sdf4Q61112 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.59■■□□□ 1.85
Sdf4Q61112 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sdf4Q61112 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms