Protein–RNA interactions for Protein: Q3UV71

Tmtc1, Transmembrane and TPR repeat-containing protein 1, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmtc1Q3UV71 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Tmtc1Q3UV71 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.56■■■□□ 2.32
Tmtc1Q3UV71 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Tmtc1Q3UV71 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.46■■■□□ 2.31
Tmtc1Q3UV71 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Tmtc1Q3UV71 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Tmtc1Q3UV71 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Tmtc1Q3UV71 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Tmtc1Q3UV71 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Tmtc1Q3UV71 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tmtc1Q3UV71 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tmtc1Q3UV71 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Tmtc1Q3UV71 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.29■■■□□ 2.28
Tmtc1Q3UV71 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Tmtc1Q3UV71 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.24■■■□□ 2.27
Tmtc1Q3UV71 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Tmtc1Q3UV71 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Tmtc1Q3UV71 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Tmtc1Q3UV71 Gm25238-201ENSMUST00000174914 89 ntBASIC29.21■■■□□ 2.27
Tmtc1Q3UV71 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.17■■■□□ 2.26
Tmtc1Q3UV71 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Tmtc1Q3UV71 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
Tmtc1Q3UV71 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Tmtc1Q3UV71 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Tmtc1Q3UV71 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Tmtc1Q3UV71 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Tmtc1Q3UV71 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.04■■■□□ 2.24
Tmtc1Q3UV71 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Tmtc1Q3UV71 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Tmtc1Q3UV71 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.96■■■□□ 2.23
Tmtc1Q3UV71 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.94■■■□□ 2.22
Tmtc1Q3UV71 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Tmtc1Q3UV71 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Tmtc1Q3UV71 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.91■■■□□ 2.22
Tmtc1Q3UV71 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.84■■■□□ 2.21
Tmtc1Q3UV71 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
Tmtc1Q3UV71 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.81■■■□□ 2.2
Tmtc1Q3UV71 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Tmtc1Q3UV71 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Tmtc1Q3UV71 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Tmtc1Q3UV71 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
Tmtc1Q3UV71 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tmtc1Q3UV71 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tmtc1Q3UV71 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tmtc1Q3UV71 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Tmtc1Q3UV71 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.68■■■□□ 2.18
Tmtc1Q3UV71 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Tmtc1Q3UV71 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Tmtc1Q3UV71 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.67■■■□□ 2.18
Tmtc1Q3UV71 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Tmtc1Q3UV71 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Tmtc1Q3UV71 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.61■■■□□ 2.17
Tmtc1Q3UV71 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tmtc1Q3UV71 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.59■■■□□ 2.17
Tmtc1Q3UV71 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Tmtc1Q3UV71 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Tmtc1Q3UV71 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tmtc1Q3UV71 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.53■■■□□ 2.16
Tmtc1Q3UV71 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Tmtc1Q3UV71 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.52■■■□□ 2.16
Tmtc1Q3UV71 Rab21-202ENSMUST00000218831 843 ntBASIC28.49■■■□□ 2.15
Tmtc1Q3UV71 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Tmtc1Q3UV71 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.46■■■□□ 2.15
Tmtc1Q3UV71 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Tmtc1Q3UV71 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tmtc1Q3UV71 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.41■■■□□ 2.14
Tmtc1Q3UV71 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tmtc1Q3UV71 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Tmtc1Q3UV71 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Tmtc1Q3UV71 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.36■■■□□ 2.13
Tmtc1Q3UV71 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tmtc1Q3UV71 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tmtc1Q3UV71 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tmtc1Q3UV71 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Tmtc1Q3UV71 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tmtc1Q3UV71 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Tmtc1Q3UV71 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Tmtc1Q3UV71 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tmtc1Q3UV71 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Tmtc1Q3UV71 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Tmtc1Q3UV71 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.27■■■□□ 2.12
Tmtc1Q3UV71 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Tmtc1Q3UV71 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
Tmtc1Q3UV71 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.25■■■□□ 2.11
Tmtc1Q3UV71 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
Tmtc1Q3UV71 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Tmtc1Q3UV71 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Tmtc1Q3UV71 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tmtc1Q3UV71 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Tmtc1Q3UV71 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tmtc1Q3UV71 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tmtc1Q3UV71 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Tmtc1Q3UV71 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Tmtc1Q3UV71 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tmtc1Q3UV71 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tmtc1Q3UV71 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tmtc1Q3UV71 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.09■■■□□ 2.09
Tmtc1Q3UV71 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tmtc1Q3UV71 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Tmtc1Q3UV71 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms