Protein–RNA interactions for Protein: Q03049

YDR541C, Putative uncharacterized oxidoreductase YDR541C, yeastyeast

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YDR541CQ03049 SIS1YNL007C 1059 nt11.45□□□□□ -0.58
YDR541CQ03049 YOL037CYOL037C 354 nt11.45□□□□□ -0.58
YDR541CQ03049 CAC2YML102W 1407 nt11.41□□□□□ -0.58
YDR541CQ03049 EMI2YDR516C 1503 nt11.38□□□□□ -0.59
YDR541CQ03049 ART5YGR068C 1761 nt11.29□□□□□ -0.6
YDR541CQ03049 YDL221WYDL221W 552 nt11.28□□□□□ -0.6
YDR541CQ03049 tM(CAU)CtM(CAU)C 72 nt11.28□□□□□ -0.6
YDR541CQ03049 IMT4tM(CAU)E 72 nt11.28□□□□□ -0.6
YDR541CQ03049 IMT3tM(CAU)J3 72 nt11.28□□□□□ -0.6
YDR541CQ03049 IMT1tM(CAU)O1 72 nt11.28□□□□□ -0.6
YDR541CQ03049 IMT2tM(CAU)P 72 nt11.28□□□□□ -0.6
YDR541CQ03049 GFD2YCL036W 1701 nt11.26□□□□□ -0.61
YDR541CQ03049 YMR090WYMR090W 684 nt11.25□□□□□ -0.61
YDR541CQ03049 TIR4YOR009W 1464 nt11.25□□□□□ -0.61
YDR541CQ03049 YLR154C-GYLR154C-G 150 nt11.22□□□□□ -0.61
YDR541CQ03049 IRC15YPL017C 1500 nt11.22□□□□□ -0.61
YDR541CQ03049 YBR220CYBR220C 1683 nt11.22□□□□□ -0.61
YDR541CQ03049 PET9YBL030C 957 nt11.2□□□□□ -0.62
YDR541CQ03049 YLR281CYLR281C 468 nt11.18□□□□□ -0.62
YDR541CQ03049 SDH1YKL148C 1923 nt11.17□□□□□ -0.62
YDR541CQ03049 WHI5YOR083W 888 nt11.17□□□□□ -0.62
YDR541CQ03049 FPS1YLL043W 2010 nt11.17□□□□□ -0.62
YDR541CQ03049 RTS2YOR077W 699 nt11.15□□□□□ -0.62
YDR541CQ03049 YCH1YGR203W 447 nt11.14□□□□□ -0.63
YDR541CQ03049 YJL152WYJL152W 360 nt11.14□□□□□ -0.63
YDR541CQ03049 YMR057CYMR057C 372 nt11.14□□□□□ -0.63
YDR541CQ03049 GIS3YLR094C 1509 nt11.14□□□□□ -0.63
YDR541CQ03049 SCC4YER147C 1875 nt11.09□□□□□ -0.63
YDR541CQ03049 PUS2YGL063W 1113 nt11.09□□□□□ -0.63
YDR541CQ03049 MOT3YMR070W 1473 nt11.01□□□□□ -0.65
YDR541CQ03049 CUE1YMR264W 612 nt11.01□□□□□ -0.65
YDR541CQ03049 YCL048W-AYCL048W-A 240 nt10.94□□□□□ -0.66
YDR541CQ03049 YPR011CYPR011C 981 nt10.93□□□□□ -0.66
YDR541CQ03049 YLR236CYLR236C 324 nt10.92□□□□□ -0.66
YDR541CQ03049 DSK2YMR276W 1122 nt10.91□□□□□ -0.66
YDR541CQ03049 IDH1YNL037C 1083 nt10.89□□□□□ -0.67
YDR541CQ03049 IMP2'YIL154C 1041 nt10.87□□□□□ -0.67
YDR541CQ03049 YIL100WYIL100W 354 nt10.86□□□□□ -0.67
YDR541CQ03049 GBP2YCL011C 1284 nt10.84□□□□□ -0.67
YDR541CQ03049 YSC84YHR016C 1407 nt10.84□□□□□ -0.67
YDR541CQ03049 PCH2YBR186W 1695 nt10.83□□□□□ -0.68
YDR541CQ03049 RRT12YCR045C 1476 nt10.82□□□□□ -0.68
YDR541CQ03049 GUT2YIL155C 1950 nt10.82□□□□□ -0.68
YDR541CQ03049 YHL050CYHL050C 2094 nt10.81□□□□□ -0.68
YDR541CQ03049 FMP45YDL222C 930 nt10.8□□□□□ -0.68
YDR541CQ03049 MRPL8YJL063C 717 nt10.8□□□□□ -0.68
YDR541CQ03049 RRD1YIL153W 1182 nt10.79□□□□□ -0.68
YDR541CQ03049 SEC11YIR022W 504 nt10.77□□□□□ -0.69
YDR541CQ03049 DED1YOR204W 1815 nt10.76□□□□□ -0.69
YDR541CQ03049 UME6YDR207C 2511 nt10.75□□□□□ -0.69
YDR541CQ03049 YDR433WYDR433W 441 nt10.74□□□□□ -0.69
YDR541CQ03049 YNL195CYNL195C 786 nt10.73□□□□□ -0.69
YDR541CQ03049 LPX1YOR084W 1164 nt10.73□□□□□ -0.69
YDR541CQ03049 MXR2YCL033C 507 nt10.73□□□□□ -0.69
YDR541CQ03049 TCD2YKL027W 1344 nt10.72□□□□□ -0.69
YDR541CQ03049 ERV46YAL042W 1248 nt10.71□□□□□ -0.69
YDR541CQ03049 FMT1YBL013W 1206 nt10.68□□□□□ -0.7
YDR541CQ03049 ADO1YJR105W 1023 nt10.66□□□□□ -0.7
YDR541CQ03049 YKR040CYKR040C 504 nt10.64□□□□□ -0.71
YDR541CQ03049 PIB2YGL023C 1908 nt10.63□□□□□ -0.71
YDR541CQ03049 FMP52YER004W 696 nt10.6□□□□□ -0.71
YDR541CQ03049 ADH2YMR303C 1047 nt10.55□□□□□ -0.72
YDR541CQ03049 PCM1YEL058W 1674 nt10.54□□□□□ -0.72
YDR541CQ03049 FRD1YEL047C 1413 nt10.54□□□□□ -0.72
YDR541CQ03049 CWP1YKL096W 720 nt10.54□□□□□ -0.72
YDR541CQ03049 SOR2YDL246C 1074 nt10.53□□□□□ -0.72
YDR541CQ03049 SOR1YJR159W 1074 nt10.53□□□□□ -0.72
YDR541CQ03049 BOR1YNL275W 1731 nt10.53□□□□□ -0.72
YDR541CQ03049 RTF1YGL244W 1677 nt10.52□□□□□ -0.73
YDR541CQ03049 YEL076C-AYEL076C-A 651 nt10.51□□□□□ -0.73
YDR541CQ03049 YEL076CYEL076C 651 nt10.51□□□□□ -0.73
YDR541CQ03049 YLR464WYLR464W 651 nt10.51□□□□□ -0.73
YDR541CQ03049 SPP1YPL138C 1062 nt10.51□□□□□ -0.73
YDR541CQ03049 NCP1YHR042W 2076 nt10.5□□□□□ -0.73
YDR541CQ03049 YCL042WYCL042W 360 nt10.5□□□□□ -0.73
YDR541CQ03049 LCB1YMR296C 1677 nt10.49□□□□□ -0.73
YDR541CQ03049 BOP3YNL042W 1191 nt10.47□□□□□ -0.73
YDR541CQ03049 SNF6YHL025W 999 nt10.45□□□□□ -0.74
YDR541CQ03049 SIM1YIL123W 1431 nt10.41□□□□□ -0.74
YDR541CQ03049 PTK1YKL198C 1989 nt10.4□□□□□ -0.74
YDR541CQ03049 RTG1YOL067C 534 nt10.4□□□□□ -0.74
YDR541CQ03049 BIO4YNR057C 714 nt10.39□□□□□ -0.75
YDR541CQ03049 UBX6YJL048C 1191 nt10.38□□□□□ -0.75
YDR541CQ03049 YIH1YCR059C 777 nt10.35□□□□□ -0.75
YDR541CQ03049 MCH5YOR306C 1566 nt10.35□□□□□ -0.75
YDR541CQ03049 PTH1YHR189W 573 nt10.33□□□□□ -0.76
YDR541CQ03049 RNQ1YCL028W 1218 nt10.33□□□□□ -0.76
YDR541CQ03049 HUA1YGR268C 597 nt10.31□□□□□ -0.76
YDR541CQ03049 YLL053CYLL053C 459 nt10.29□□□□□ -0.76
YDR541CQ03049 DIC1YLR348C 897 nt10.29□□□□□ -0.76
YDR541CQ03049 LYS4YDR234W 2082 nt10.27□□□□□ -0.76
YDR541CQ03049 YDR094WYDR094W 336 nt10.23□□□□□ -0.77
YDR541CQ03049 YLR235CYLR235C 399 nt10.23□□□□□ -0.77
YDR541CQ03049 FTR1YER145C 1215 nt10.2□□□□□ -0.78
YDR541CQ03049 ERF2YLR246W 1080 nt10.2□□□□□ -0.78
YDR541CQ03049 CRR1YLR213C 1269 nt10.19□□□□□ -0.78
YDR541CQ03049 YFL054CYFL054C 1941 nt10.19□□□□□ -0.78
YDR541CQ03049 ATF2YGR177C 1608 nt10.18□□□□□ -0.78
YDR541CQ03049 TIM23YNR017W 669 nt10.17□□□□□ -0.78
YDR541CQ03049 GAL1YBR020W 1587 nt10.17□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms