Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 PTP1YDL230W 1008 nt12.58□□□□□ -0.4
NRD1P53617 RPP2AYOL039W 321 nt12.57□□□□□ -0.4
NRD1P53617 WHI5YOR083W 888 nt12.57□□□□□ -0.4 RIP-Chip
NRD1P53617 YLR154C-GYLR154C-G 150 nt12.53□□□□□ -0.4
NRD1P53617 PUS2YGL063W 1113 nt12.5□□□□□ -0.41
NRD1P53617 CAC2YML102W 1407 nt12.47□□□□□ -0.41
NRD1P53617 TIR4YOR009W 1464 nt12.46□□□□□ -0.42
NRD1P53617 ART5YGR068C 1761 nt12.45□□□□□ -0.42
NRD1P53617 SSA4YER103W 1929 nt12.45□□□□□ -0.42
NRD1P53617 YCH1YGR203W 447 nt12.4□□□□□ -0.42
NRD1P53617 YJL152WYJL152W 360 nt12.4□□□□□ -0.42
NRD1P53617 EMI2YDR516C 1503 nt12.39□□□□□ -0.43
NRD1P53617 GFD2YCL036W 1701 nt12.39□□□□□ -0.43
NRD1P53617 PET9YBL030C 957 nt12.35□□□□□ -0.43 RIP-Chip
NRD1P53617 YPR011CYPR011C 981 nt12.34□□□□□ -0.43
NRD1P53617 YLR236CYLR236C 324 nt12.32□□□□□ -0.44
NRD1P53617 YDL221WYDL221W 552 nt12.3□□□□□ -0.44
NRD1P53617 YMR057CYMR057C 372 nt12.3□□□□□ -0.44
NRD1P53617 DSK2YMR276W 1122 nt12.3□□□□□ -0.44
NRD1P53617 IRC15YPL017C 1500 nt12.28□□□□□ -0.44
NRD1P53617 RTS2YOR077W 699 nt12.25□□□□□ -0.45
NRD1P53617 IMP2'YIL154C 1041 nt12.24□□□□□ -0.45
NRD1P53617 YMR090WYMR090W 684 nt12.23□□□□□ -0.45
NRD1P53617 IDH1YNL037C 1083 nt12.18□□□□□ -0.46
NRD1P53617 GIS3YLR094C 1509 nt12.17□□□□□ -0.46
NRD1P53617 FMP45YDL222C 930 nt12.17□□□□□ -0.46
NRD1P53617 YBR220CYBR220C 1683 nt12.16□□□□□ -0.46
NRD1P53617 FPS1YLL043W 2010 nt12.15□□□□□ -0.46
NRD1P53617 SDH1YKL148C 1923 nt12.14□□□□□ -0.47
NRD1P53617 YCL048W-AYCL048W-A 240 nt12.13□□□□□ -0.47
NRD1P53617 CUE1YMR264W 612 nt12.1□□□□□ -0.47
NRD1P53617 GBP2YCL011C 1284 nt12.1□□□□□ -0.47
NRD1P53617 LPX1YOR084W 1164 nt12.09□□□□□ -0.47 RIP-Chip
NRD1P53617 SCC4YER147C 1875 nt12.08□□□□□ -0.48
NRD1P53617 MOT3YMR070W 1473 nt12.08□□□□□ -0.48
NRD1P53617 ERV46YAL042W 1248 nt12.06□□□□□ -0.48
NRD1P53617 YDR433WYDR433W 441 nt12.05□□□□□ -0.48
NRD1P53617 MXR2YCL033C 507 nt12.02□□□□□ -0.49
NRD1P53617 RRD1YIL153W 1182 nt11.98□□□□□ -0.49
NRD1P53617 BDF1YLR399C 2061 nt11.98□□□□□ -0.49
NRD1P53617 DED1YOR204W 1815 nt11.97□□□□□ -0.49
NRD1P53617 TCD2YKL027W 1344 nt11.95□□□□□ -0.5
NRD1P53617 YKR040CYKR040C 504 nt11.95□□□□□ -0.5
NRD1P53617 YIL100WYIL100W 354 nt11.92□□□□□ -0.5
NRD1P53617 SPP1YPL138C 1062 nt11.9□□□□□ -0.5
NRD1P53617 FMT1YBL013W 1206 nt11.86□□□□□ -0.51
NRD1P53617 TAT1YBR069C 1860 nt11.8□□□□□ -0.52 RIP-Chip
NRD1P53617 FRD1YEL047C 1413 nt11.79□□□□□ -0.52
NRD1P53617 YSC84YHR016C 1407 nt11.79□□□□□ -0.52
NRD1P53617 RRT12YCR045C 1476 nt11.79□□□□□ -0.52
NRD1P53617 YHL050CYHL050C 2094 nt11.76□□□□□ -0.53
NRD1P53617 SOR2YDL246C 1074 nt11.74□□□□□ -0.53
NRD1P53617 FMP52YER004W 696 nt11.74□□□□□ -0.53
NRD1P53617 SOR1YJR159W 1074 nt11.74□□□□□ -0.53
NRD1P53617 YNL195CYNL195C 786 nt11.72□□□□□ -0.53
NRD1P53617 CWP1YKL096W 720 nt11.69□□□□□ -0.54
NRD1P53617 ADH2YMR303C 1047 nt11.69□□□□□ -0.54
NRD1P53617 YCL042WYCL042W 360 nt11.69□□□□□ -0.54
NRD1P53617 SEC11YIR022W 504 nt11.66□□□□□ -0.54
NRD1P53617 PCM1YEL058W 1674 nt11.65□□□□□ -0.54
NRD1P53617 RTG1YOL067C 534 nt11.64□□□□□ -0.55 RIP-Chip
NRD1P53617 PCH2YBR186W 1695 nt11.62□□□□□ -0.55
NRD1P53617 PTH1YHR189W 573 nt11.59□□□□□ -0.55
NRD1P53617 SNF6YHL025W 999 nt11.57□□□□□ -0.56 RIP-Chip
NRD1P53617 GUT2YIL155C 1950 nt11.56□□□□□ -0.56
NRD1P53617 MRPL8YJL063C 717 nt11.56□□□□□ -0.56
NRD1P53617 YEL076C-AYEL076C-A 651 nt11.54□□□□□ -0.56 RIP-Chip
NRD1P53617 YEL076CYEL076C 651 nt11.54□□□□□ -0.56
NRD1P53617 YLR464WYLR464W 651 nt11.54□□□□□ -0.56
NRD1P53617 YLR235CYLR235C 399 nt11.49□□□□□ -0.57
NRD1P53617 LCB1YMR296C 1677 nt11.49□□□□□ -0.57
NRD1P53617 YIH1YCR059C 777 nt11.47□□□□□ -0.57
NRD1P53617 DIC1YLR348C 897 nt11.47□□□□□ -0.57 RIP-Chip
NRD1P53617 PAC11YDR488C 1602 nt11.46□□□□□ -0.57
NRD1P53617 BIO4YNR057C 714 nt11.46□□□□□ -0.57
NRD1P53617 RNQ1YCL028W 1218 nt11.45□□□□□ -0.58
NRD1P53617 PIB2YGL023C 1908 nt11.45□□□□□ -0.58
NRD1P53617 SIM1YIL123W 1431 nt11.44□□□□□ -0.58
NRD1P53617 NCP1YHR042W 2076 nt11.44□□□□□ -0.58
NRD1P53617 YKL030WYKL030W 606 nt11.44□□□□□ -0.58
NRD1P53617 ADO1YJR105W 1023 nt11.43□□□□□ -0.58
NRD1P53617 YLL053CYLL053C 459 nt11.38□□□□□ -0.59
NRD1P53617 TIM23YNR017W 669 nt11.38□□□□□ -0.59
NRD1P53617 RTF1YGL244W 1677 nt11.37□□□□□ -0.59
NRD1P53617 HUA1YGR268C 597 nt11.36□□□□□ -0.59 RIP-Chip
NRD1P53617 BOP3YNL042W 1191 nt11.35□□□□□ -0.59
NRD1P53617 YLR179CYLR179C 606 nt11.32□□□□□ -0.6
NRD1P53617 NVJ2YPR091C 2313 nt11.3□□□□□ -0.6
NRD1P53617 FTR1YER145C 1215 nt11.3□□□□□ -0.6 RIP-Chip
NRD1P53617 GAL1YBR020W 1587 nt11.27□□□□□ -0.61
NRD1P53617 WSC2YNL283C 1512 nt11.26□□□□□ -0.61
NRD1P53617 LYS4YDR234W 2082 nt11.26□□□□□ -0.61
NRD1P53617 PTK1YKL198C 1989 nt11.25□□□□□ -0.61
NRD1P53617 TRM5YHR070W 1500 nt11.25□□□□□ -0.61
NRD1P53617 ATF2YGR177C 1608 nt11.24□□□□□ -0.61 RIP-Chip
NRD1P53617 AHT1YHR093W 549 nt11.23□□□□□ -0.61
NRD1P53617 ERF2YLR246W 1080 nt11.23□□□□□ -0.61
NRD1P53617 CRR1YLR213C 1269 nt11.22□□□□□ -0.61
NRD1P53617 YPR064WYPR064W 420 nt11.2□□□□□ -0.62
NRD1P53617 AQY1YPR192W 918 nt11.19□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms