Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.72□□□□□ -0.374e-15■■■■■ 48.2
NCBP2P52298 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.412e-10■■■■■ 48.2
NCBP2P52298 SH3BP1-202ENST00000417536 2858 ntTSL 217.58■□□□□ 0.42e-10■■■■■ 48.2
NCBP2P52298 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.91■□□□□ 0.142e-10■■■■■ 48.2
NCBP2P52298 SH3BP1-206ENST00000469947 2612 ntTSL 212.63□□□□□ -0.392e-10■■■■■ 48.2
NCBP2P52298 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC12□□□□□ -0.492e-10■■■■■ 48.2
NCBP2P52298 SH3BP1-203ENST00000451997 3123 ntTSL 211.81□□□□□ -0.522e-10■■■■■ 48.2
NCBP2P52298 FAM238C-203ENST00000640121 3620 ntTSL 1 (best) BASIC10.18□□□□□ -0.782e-10■■■■■ 48.2
NCBP2P52298 FAM238C-201ENST00000638416 868 ntTSL 2 BASIC10.17□□□□□ -0.782e-10■■■■■ 48.2
NCBP2P52298 FAM238C-205ENST00000640641 391 ntBASIC8.16□□□□□ -1.12e-10■■■■■ 48.2
NCBP2P52298 HNF4A-AS1-201ENST00000452481 648 ntTSL 1 (best) BASIC9.3□□□□□ -0.926e-10■■■■■ 47.3
NCBP2P52298 RBL1-204ENST00000527999 599 ntTSL 519.63■□□□□ 0.731e-26■■■■■ 46.9
NCBP2P52298 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.55□□□□□ -0.241e-26■■■■■ 46.9
NCBP2P52298 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.311e-26■■■■■ 46.9
NCBP2P52298 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC10.45□□□□□ -0.745e-12■■■■■ 46.5
NCBP2P52298 RNU2-63P-201ENST00000410792 194 ntBASIC1.77□□□□□ -2.135e-13■■■■■ 45.4
NCBP2P52298 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.123e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.33e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-214ENST00000548273 818 ntTSL 311.61□□□□□ -0.553e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC11.19□□□□□ -0.623e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-217ENST00000549988 544 ntTSL 311.06□□□□□ -0.643e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC10.84□□□□□ -0.673e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-210ENST00000547773 1967 ntTSL 5 BASIC10.76□□□□□ -0.693e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-205ENST00000542344 1675 ntTSL 2 BASIC10.57□□□□□ -0.723e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-215ENST00000549479 573 ntTSL 210.18□□□□□ -0.783e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-203ENST00000431879 2031 ntTSL 2 BASIC9.66□□□□□ -0.863e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-216ENST00000549596 1838 ntTSL 2 BASIC9.54□□□□□ -0.883e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-213ENST00000548044 1339 ntTSL 5 BASIC9.21□□□□□ -0.943e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-207ENST00000547479 623 ntTSL 58.71□□□□□ -1.023e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-209ENST00000547704 760 ntTSL 58.6□□□□□ -1.033e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-221ENST00000551600 786 ntTSL 58.6□□□□□ -1.033e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.373e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-219ENST00000551500 552 ntTSL 1 (best)4.48□□□□□ -1.693e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.87□□□□□ -1.793e-13■■■■■ 45.2
NCBP2P52298 NAP1L1-218ENST00000550934 851 ntTSL 52.42□□□□□ -2.023e-13■■■■■ 45.2
NCBP2P52298 CSRNP2-203ENST00000548206 685 ntTSL 321.03■□□□□ 0.967e-12■■■■■ 45.1
NCBP2P52298 CSRNP2-202ENST00000546935 681 ntTSL 520.51■□□□□ 0.877e-12■■■■■ 45.1
NCBP2P52298 CSRNP2-204ENST00000548981 845 ntTSL 320.14■□□□□ 0.817e-12■■■■■ 45.1
NCBP2P52298 CSRNP2-207ENST00000552680 576 ntTSL 418.6■□□□□ 0.577e-12■■■■■ 45.1
NCBP2P52298 CSRNP2-205ENST00000550461 580 ntTSL 517.17■□□□□ 0.347e-12■■■■■ 45.1
NCBP2P52298 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.117e-12■■■■■ 45.1
NCBP2P52298 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.341e-8■■■■■ 45.1
NCBP2P52298 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.011e-8■■■■■ 45.1
NCBP2P52298 ZNF131-205ENST00000504359 565 ntTSL 414.93□□□□□ -0.021e-8■■■■■ 45.1
NCBP2P52298 ZNF131-220ENST00000515326 1050 ntTSL 1 (best)10.65□□□□□ -0.71e-8■■■■■ 45.1
NCBP2P52298 ZNF131-216ENST00000510026 2599 ntTSL 510.46□□□□□ -0.741e-8■■■■■ 45.1
NCBP2P52298 ZNF131-212ENST00000509156 2063 ntTSL 2 BASIC9.94□□□□□ -0.821e-8■■■■■ 45.1
NCBP2P52298 ZNF131-213ENST00000509341 572 ntTSL 59.86□□□□□ -0.831e-8■■■■■ 45.1
NCBP2P52298 ZNF131-209ENST00000507393 583 ntTSL 47.53□□□□□ -1.21e-8■■■■■ 45.1
NCBP2P52298 ZNF131-207ENST00000507218 1352 ntTSL 1 (best)7.46□□□□□ -1.211e-8■■■■■ 45.1
NCBP2P52298 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.391e-8■■■■■ 45.1
NCBP2P52298 ZNF131-210ENST00000508259 501 ntTSL 51.95□□□□□ -2.11e-8■■■■■ 45.1
NCBP2P52298 FRYL-203ENST00000502520 441 ntTSL 216.07■□□□□ 0.162e-11■■■■■ 44.5
NCBP2P52298 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.372e-11■■■■■ 44.5
NCBP2P52298 AC008014.1-201ENST00000551503 829 ntTSL 3 BASIC8.87□□□□□ -0.995e-10■■■■■ 44.5
NCBP2P52298 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.935e-13■■■■■ 44.3
NCBP2P52298 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.815e-13■■■■■ 44.3
NCBP2P52298 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.311e-40■■■■■ 43.9
NCBP2P52298 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.311e-40■■■■■ 43.9
NCBP2P52298 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.161e-12■■■■■ 43.4
NCBP2P52298 DCUN1D2-203ENST00000438545 1025 ntTSL 519.85■□□□□ 0.771e-12■■■■■ 43.4
NCBP2P52298 DCUN1D2-211ENST00000496873 499 ntTSL 319.62■□□□□ 0.731e-12■■■■■ 43.4
NCBP2P52298 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.21□□□□□ -0.141e-12■■■■■ 43.4
NCBP2P52298 DCUN1D2-202ENST00000375403 3164 ntTSL 210.22□□□□□ -0.771e-12■■■■■ 43.4
NCBP2P52298 DCUN1D2-204ENST00000439909 562 ntTSL 58.54□□□□□ -1.041e-12■■■■■ 43.4
NCBP2P52298 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.692e-12■■■■■ 43.1
NCBP2P52298 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.642e-12■■■■■ 43.1
NCBP2P52298 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.482e-12■■■■■ 43.1
NCBP2P52298 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.042e-12■■■■■ 43.1
NCBP2P52298 DLGAP4-214ENST00000491207 469 ntTSL 413.27□□□□□ -0.292e-12■■■■■ 43.1
NCBP2P52298 DLGAP4-211ENST00000482037 603 ntTSL 511.82□□□□□ -0.522e-12■■■■■ 43.1
NCBP2P52298 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.562e-12■■■■■ 43.1
NCBP2P52298 DLGAP4-212ENST00000482872 839 ntTSL 511.17□□□□□ -0.622e-12■■■■■ 43.1
NCBP2P52298 DLGAP4-215ENST00000495241 794 ntTSL 210.27□□□□□ -0.772e-12■■■■■ 43.1
NCBP2P52298 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.371e-11■■■■■ 42.8
NCBP2P52298 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.221e-11■■■■■ 42.8
NCBP2P52298 RCC1-210ENST00000434290 1070 ntTSL 512.51□□□□□ -0.414e-33■■■■■ 42.7
NCBP2P52298 RCC1-207ENST00000427469 903 ntTSL 511.9□□□□□ -0.54e-33■■■■■ 42.7
NCBP2P52298 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.724e-33■■■■■ 42.7
NCBP2P52298 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.854e-33■■■■■ 42.7
NCBP2P52298 SNHG3-201ENST00000413987 2201 ntTSL 1 (best)8.2□□□□□ -1.14e-33■■■■■ 42.7
NCBP2P52298 SNHG3-203ENST00000447507 185 ntTSL 1 (best)0.2□□□□□ -2.384e-33■■■■■ 42.7
NCBP2P52298 SPIN1-202ENST00000462844 599 ntTSL 219.3■□□□□ 0.686e-7■■■■■ 42.4
NCBP2P52298 SPIN1-203ENST00000469017 2082 ntTSL 218.96■□□□□ 0.636e-7■■■■■ 42.4
NCBP2P52298 SPIN1-206ENST00000485804 814 ntTSL 316.97■□□□□ 0.316e-7■■■■■ 42.4
NCBP2P52298 SPIN1-205ENST00000485565 706 ntTSL 316.34■□□□□ 0.216e-7■■■■■ 42.4
NCBP2P52298 SPIN1-201ENST00000375859 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.56e-7■■■■■ 42.4
NCBP2P52298 PLEKHA1-208ENST00000494222 603 ntTSL 318.72■□□□□ 0.592e-7■■■■■ 42
NCBP2P52298 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.562e-7■■■■■ 42
NCBP2P52298 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.27■■□□□ 12e-7■■■■■ 41.8
NCBP2P52298 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.71■□□□□ 0.592e-7■■■■■ 41.8
NCBP2P52298 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.332e-7■■■■■ 41.8
NCBP2P52298 IRF3-205ENST00000593337 633 ntTSL 317.02■□□□□ 0.322e-7■■■■■ 41.8
NCBP2P52298 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.29■□□□□ 0.22e-7■■■■■ 41.8
NCBP2P52298 IRF3-230ENST00000601809 768 ntTSL 216.04■□□□□ 0.162e-7■■■■■ 41.8
NCBP2P52298 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.012e-7■■■■■ 41.8
NCBP2P52298 IRF3-219ENST00000597636 2874 ntTSL 514.44□□□□□ -0.12e-7■■■■■ 41.8
NCBP2P52298 IRF3-226ENST00000600453 700 ntTSL 314.31□□□□□ -0.122e-7■■■■■ 41.8
NCBP2P52298 IRF3-206ENST00000593818 924 ntTSL 211.43□□□□□ -0.582e-7■■■■■ 41.8
NCBP2P52298 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.536e-12■■■■■ 41.5
Retrieved 100 of 18,329 protein–RNA pairs in 341.5 ms