Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 YHR165W-AYHR165W-A 312 nt12.12□□□□□ -0.47
LSM5P40089 MEP2YNL142W 1500 nt12.1□□□□□ -0.47
LSM5P40089 SIS1YNL007C 1059 nt12.09□□□□□ -0.47
LSM5P40089 PUS2YGL063W 1113 nt12.07□□□□□ -0.48
LSM5P40089 YLR154C-GYLR154C-G 150 nt12.06□□□□□ -0.48
LSM5P40089 RPP2AYOL039W 321 nt12.01□□□□□ -0.49
LSM5P40089 PTP1YDL230W 1008 nt11.97□□□□□ -0.49
LSM5P40089 IMP2'YIL154C 1041 nt11.92□□□□□ -0.5
LSM5P40089 DSK2YMR276W 1122 nt11.9□□□□□ -0.5
LSM5P40089 DCW1YKL046C 1350 nt11.89□□□□□ -0.51
LSM5P40089 TIR4YOR009W 1464 nt11.89□□□□□ -0.51
LSM5P40089 YCH1YGR203W 447 nt11.87□□□□□ -0.51
LSM5P40089 YJL152WYJL152W 360 nt11.86□□□□□ -0.51
LSM5P40089 YPR011CYPR011C 981 nt11.86□□□□□ -0.51
LSM5P40089 YLR236CYLR236C 324 nt11.85□□□□□ -0.51
LSM5P40089 ART5YGR068C 1761 nt11.84□□□□□ -0.51
LSM5P40089 PET9YBL030C 957 nt11.82□□□□□ -0.52
LSM5P40089 CAC2YML102W 1407 nt11.82□□□□□ -0.52
LSM5P40089 GFD2YCL036W 1701 nt11.8□□□□□ -0.52
LSM5P40089 EMI2YDR516C 1503 nt11.76□□□□□ -0.53
LSM5P40089 FMP45YDL222C 930 nt11.75□□□□□ -0.53
LSM5P40089 IDH1YNL037C 1083 nt11.74□□□□□ -0.53
LSM5P40089 YMR057CYMR057C 372 nt11.71□□□□□ -0.53
LSM5P40089 BDF1YLR399C 2061 nt11.7□□□□□ -0.54
LSM5P40089 YDL221WYDL221W 552 nt11.69□□□□□ -0.54
LSM5P40089 ERV46YAL042W 1248 nt11.68□□□□□ -0.54
LSM5P40089 IRC15YPL017C 1500 nt11.65□□□□□ -0.54
LSM5P40089 YMR090WYMR090W 684 nt11.65□□□□□ -0.54
LSM5P40089 LPX1YOR084W 1164 nt11.63□□□□□ -0.55
LSM5P40089 YCL048W-AYCL048W-A 240 nt11.62□□□□□ -0.55
LSM5P40089 GBP2YCL011C 1284 nt11.61□□□□□ -0.55
LSM5P40089 RTS2YOR077W 699 nt11.6□□□□□ -0.55
LSM5P40089 FPS1YLL043W 2010 nt11.6□□□□□ -0.55
LSM5P40089 YDR433WYDR433W 441 nt11.56□□□□□ -0.56
LSM5P40089 TAT1YBR069C 1860 nt11.55□□□□□ -0.56
LSM5P40089 YKR040CYKR040C 504 nt11.55□□□□□ -0.56
LSM5P40089 CUE1YMR264W 612 nt11.55□□□□□ -0.56
LSM5P40089 GIS3YLR094C 1509 nt11.55□□□□□ -0.56
LSM5P40089 SDH1YKL148C 1923 nt11.53□□□□□ -0.56
LSM5P40089 YBR220CYBR220C 1683 nt11.51□□□□□ -0.57
LSM5P40089 TCD2YKL027W 1344 nt11.49□□□□□ -0.57
LSM5P40089 MXR2YCL033C 507 nt11.48□□□□□ -0.57
LSM5P40089 SCC4YER147C 1875 nt11.47□□□□□ -0.57
LSM5P40089 DED1YOR204W 1815 nt11.46□□□□□ -0.57
LSM5P40089 RRD1YIL153W 1182 nt11.46□□□□□ -0.57
LSM5P40089 SPP1YPL138C 1062 nt11.43□□□□□ -0.58
LSM5P40089 YIL100WYIL100W 354 nt11.38□□□□□ -0.59
LSM5P40089 MRPL8YJL063C 717 nt11.38□□□□□ -0.59
LSM5P40089 FRD1YEL047C 1413 nt11.34□□□□□ -0.59
LSM5P40089 FMP52YER004W 696 nt11.33□□□□□ -0.6
LSM5P40089 FMT1YBL013W 1206 nt11.33□□□□□ -0.6
LSM5P40089 SOR2YDL246C 1074 nt11.32□□□□□ -0.6
LSM5P40089 SOR1YJR159W 1074 nt11.32□□□□□ -0.6
LSM5P40089 RTG1YOL067C 534 nt11.3□□□□□ -0.6
LSM5P40089 YCL042WYCL042W 360 nt11.25□□□□□ -0.61
LSM5P40089 YEL076C-AYEL076C-A 651 nt11.24□□□□□ -0.61
LSM5P40089 YEL076CYEL076C 651 nt11.24□□□□□ -0.61
LSM5P40089 YLR464WYLR464W 651 nt11.24□□□□□ -0.61
LSM5P40089 ADO1YJR105W 1023 nt11.21□□□□□ -0.61
LSM5P40089 PAC11YDR488C 1602 nt11.2□□□□□ -0.62
LSM5P40089 YNL195CYNL195C 786 nt11.18□□□□□ -0.62
LSM5P40089 CWP1YKL096W 720 nt11.16□□□□□ -0.62
LSM5P40089 YJL225CYJL225C 5277 nt11.15□□□□□ -0.62
LSM5P40089 ADH2YMR303C 1047 nt11.15□□□□□ -0.62
LSM5P40089 YSC84YHR016C 1407 nt11.15□□□□□ -0.62
LSM5P40089 YHL050CYHL050C 2094 nt11.13□□□□□ -0.63
LSM5P40089 RRT12YCR045C 1476 nt11.13□□□□□ -0.63
LSM5P40089 PCM1YEL058W 1674 nt11.13□□□□□ -0.63
LSM5P40089 YLR235CYLR235C 399 nt11.12□□□□□ -0.63
LSM5P40089 SEC11YIR022W 504 nt11.11□□□□□ -0.63
LSM5P40089 PTH1YHR189W 573 nt11.1□□□□□ -0.63
LSM5P40089 PCH2YBR186W 1695 nt11.08□□□□□ -0.64
LSM5P40089 SNF6YHL025W 999 nt11.08□□□□□ -0.64
LSM5P40089 HUA1YGR268C 597 nt11.06□□□□□ -0.64
LSM5P40089 YKL030WYKL030W 606 nt11.05□□□□□ -0.64
LSM5P40089 GUT2YIL155C 1950 nt11.03□□□□□ -0.64
LSM5P40089 YIH1YCR059C 777 nt11.02□□□□□ -0.65
LSM5P40089 DIC1YLR348C 897 nt11.01□□□□□ -0.65
LSM5P40089 RNQ1YCL028W 1218 nt11□□□□□ -0.65
LSM5P40089 LCB1YMR296C 1677 nt11□□□□□ -0.65
LSM5P40089 TIM23YNR017W 669 nt10.96□□□□□ -0.65
LSM5P40089 BIO4YNR057C 714 nt10.93□□□□□ -0.66
LSM5P40089 SIM1YIL123W 1431 nt10.9□□□□□ -0.66
LSM5P40089 YLL053CYLL053C 459 nt10.88□□□□□ -0.67
LSM5P40089 YLR179CYLR179C 606 nt10.87□□□□□ -0.67
LSM5P40089 NCP1YHR042W 2076 nt10.86□□□□□ -0.67
LSM5P40089 YDR094WYDR094W 336 nt10.85□□□□□ -0.67
LSM5P40089 UBX6YJL048C 1191 nt10.85□□□□□ -0.67
LSM5P40089 FTR1YER145C 1215 nt10.83□□□□□ -0.68
LSM5P40089 WSC2YNL283C 1512 nt10.83□□□□□ -0.68
LSM5P40089 AHT1YHR093W 549 nt10.82□□□□□ -0.68
LSM5P40089 AQY1YPR192W 918 nt10.82□□□□□ -0.68
LSM5P40089 YPR064WYPR064W 420 nt10.81□□□□□ -0.68
LSM5P40089 PIB2YGL023C 1908 nt10.8□□□□□ -0.68
LSM5P40089 tL(GAG)GtL(GAG)G 82 nt10.8□□□□□ -0.68
LSM5P40089 GAL1YBR020W 1587 nt10.79□□□□□ -0.68
LSM5P40089 RDN37-1RDN37-1 5354 nt10.78□□□□□ -0.68
LSM5P40089 RDN37-2RDN37-2 5354 nt10.78□□□□□ -0.68
LSM5P40089 RTF1YGL244W 1677 nt10.78□□□□□ -0.68
LSM5P40089 NVJ2YPR091C 2313 nt10.77□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 555.3 ms