Protein–RNA interactions for Protein: P38805

RPF1, Ribosome production factor 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPF1P38805 RPP2AYOL039W 321 nt9.25□□□□□ -0.93
RPF1P38805 YHL050CYHL050C 2094 nt9.25□□□□□ -0.93
RPF1P38805 TIR1YER011W 765 nt9.22□□□□□ -0.93
RPF1P38805 IRC15YPL017C 1500 nt9.21□□□□□ -0.93
RPF1P38805 RPM1RPM1 483 nt9.2□□□□□ -0.94
RPF1P38805 GIS3YLR094C 1509 nt9.18□□□□□ -0.94
RPF1P38805 ALF1YNL148C 765 nt9.14□□□□□ -0.95
RPF1P38805 FUN26YAL022C 1554 nt9.13□□□□□ -0.95
RPF1P38805 HSP60YLR259C 1719 nt9.11□□□□□ -0.95
RPF1P38805 SPT8YLR055C 1809 nt9.09□□□□□ -0.95
RPF1P38805 BDH2YAL061W 1254 nt9.08□□□□□ -0.96
RPF1P38805 YFL054CYFL054C 1941 nt9.07□□□□□ -0.96
RPF1P38805 SIS1YNL007C 1059 nt9.05□□□□□ -0.96
RPF1P38805 RRT12YCR045C 1476 nt9.04□□□□□ -0.96
RPF1P38805 TRM9YML014W 840 nt9□□□□□ -0.97
RPF1P38805 NCP1YHR042W 2076 nt8.98□□□□□ -0.97
RPF1P38805 CCT6YDR188W 1641 nt8.98□□□□□ -0.97
RPF1P38805 SUF2tP(AGG)C 72 nt8.96□□□□□ -0.98
RPF1P38805 SUF10tP(AGG)N 72 nt8.96□□□□□ -0.98
RPF1P38805 YNL195CYNL195C 786 nt8.96□□□□□ -0.98
RPF1P38805 GFD2YCL036W 1701 nt8.94□□□□□ -0.98
RPF1P38805 NAR1YNL240C 1476 nt8.94□□□□□ -0.98
RPF1P38805 GLK1YCL040W 1503 nt8.9□□□□□ -0.98
RPF1P38805 ART5YGR068C 1761 nt8.89□□□□□ -0.99
RPF1P38805 SRB2YHR041C 633 nt8.89□□□□□ -0.99
RPF1P38805 DSK2YMR276W 1122 nt8.89□□□□□ -0.99
RPF1P38805 PET9YBL030C 957 nt8.88□□□□□ -0.99
RPF1P38805 CUE1YMR264W 612 nt8.88□□□□□ -0.99
RPF1P38805 LSM3YLR438C-A 270 nt8.87□□□□□ -0.99
RPF1P38805 RTS2YOR077W 699 nt8.86□□□□□ -0.99
RPF1P38805 PST2YDR032C 597 nt8.85□□□□□ -0.99
RPF1P38805 SWE1YJL187C 2460 nt8.83□□□□□ -1
RPF1P38805 YCH1YGR203W 447 nt8.8□□□□□ -1
RPF1P38805 HSL7YBR133C 2484 nt8.79□□□□□ -1
RPF1P38805 CMP2YML057W 1815 nt8.77□□□□□ -1
RPF1P38805 YIL100WYIL100W 354 nt8.76□□□□□ -1.01
RPF1P38805 AAC1YMR056C 930 nt8.75□□□□□ -1.01
RPF1P38805 DED1YOR204W 1815 nt8.74□□□□□ -1.01
RPF1P38805 MOT3YMR070W 1473 nt8.7□□□□□ -1.02
RPF1P38805 CYT2YKL087C 675 nt8.69□□□□□ -1.02
RPF1P38805 RDN25-1RDN25-1 3396 nt8.69□□□□□ -1.02
RPF1P38805 RDN25-2RDN25-2 3396 nt8.69□□□□□ -1.02
RPF1P38805 PBP1YGR178C 2169 nt8.68□□□□□ -1.02
RPF1P38805 HEL2YDR266C 1920 nt8.68□□□□□ -1.02
RPF1P38805 WWM1YFL010C 636 nt8.66□□□□□ -1.02
RPF1P38805 YGR021WYGR021W 873 nt8.66□□□□□ -1.02
RPF1P38805 PRP4YPR178W 1398 nt8.65□□□□□ -1.02
RPF1P38805 YLR236CYLR236C 324 nt8.64□□□□□ -1.03
RPF1P38805 FUR4YBR021W 1902 nt8.64□□□□□ -1.03
RPF1P38805 LCB1YMR296C 1677 nt8.62□□□□□ -1.03
RPF1P38805 TIR4YOR009W 1464 nt8.62□□□□□ -1.03
RPF1P38805 YEL076C-AYEL076C-A 651 nt8.61□□□□□ -1.03
RPF1P38805 YEL076CYEL076C 651 nt8.61□□□□□ -1.03
RPF1P38805 YFL021C-AYFL021C-A 855 nt8.61□□□□□ -1.03
RPF1P38805 YLR464WYLR464W 651 nt8.61□□□□□ -1.03
RPF1P38805 DPS1YLL018C 1674 nt8.61□□□□□ -1.03
RPF1P38805 BIO5YNR056C 1686 nt8.6□□□□□ -1.03
RPF1P38805 MET2YNL277W 1461 nt8.6□□□□□ -1.03
RPF1P38805 YMR057CYMR057C 372 nt8.59□□□□□ -1.03
RPF1P38805 YAT1YAR035W 2064 nt8.58□□□□□ -1.04
RPF1P38805 BIO4YNR057C 714 nt8.57□□□□□ -1.04
RPF1P38805 SFP1YLR403W 2052 nt8.53□□□□□ -1.04
RPF1P38805 SSN3YPL042C 1668 nt8.52□□□□□ -1.05
RPF1P38805 BMT6YLR063W 1098 nt8.51□□□□□ -1.05
RPF1P38805 GID7YCL039W 2238 nt8.51□□□□□ -1.05
RPF1P38805 NPP1YCR026C 2229 nt8.48□□□□□ -1.05
RPF1P38805 SHU1YHL006C 453 nt8.48□□□□□ -1.05
RPF1P38805 NDI1YML120C 1542 nt8.48□□□□□ -1.05
RPF1P38805 SNF1YDR477W 1902 nt8.47□□□□□ -1.05
RPF1P38805 HOM6YJR139C 1080 nt8.46□□□□□ -1.06
RPF1P38805 YKL097CYKL097C 411 nt8.44□□□□□ -1.06
RPF1P38805 LYS4YDR234W 2082 nt8.42□□□□□ -1.06
RPF1P38805 YLR281CYLR281C 468 nt8.37□□□□□ -1.07
RPF1P38805 YCL048W-AYCL048W-A 240 nt8.37□□□□□ -1.07
RPF1P38805 YKR005CYKR005C 1578 nt8.36□□□□□ -1.07
RPF1P38805 RKM5YLR137W 1104 nt8.35□□□□□ -1.07
RPF1P38805 IRC24YIR036C 792 nt8.34□□□□□ -1.07
RPF1P38805 YAL037C-BYAL037C-B 975 nt8.34□□□□□ -1.07
RPF1P38805 SNG1YGR197C 1644 nt8.33□□□□□ -1.08
RPF1P38805 SPT20YOL148C 1815 nt8.32□□□□□ -1.08
RPF1P38805 NPL3YDR432W 1245 nt8.32□□□□□ -1.08
RPF1P38805 MAE1YKL029C 2010 nt8.3□□□□□ -1.08
RPF1P38805 HMG2YLR450W 3138 nt8.29□□□□□ -1.08
RPF1P38805 YOL037CYOL037C 354 nt8.29□□□□□ -1.08
RPF1P38805 RIM8YGL045W 1629 nt8.29□□□□□ -1.08
RPF1P38805 SIM1YIL123W 1431 nt8.29□□□□□ -1.08
RPF1P38805 MNP1YGL068W 585 nt8.28□□□□□ -1.08
RPF1P38805 TPO4YOR273C 1980 nt8.27□□□□□ -1.09
RPF1P38805 YGL114WYGL114W 2178 nt8.26□□□□□ -1.09
RPF1P38805 FMP52YER004W 696 nt8.25□□□□□ -1.09
RPF1P38805 YJL152WYJL152W 360 nt8.24□□□□□ -1.09
RPF1P38805 CCA1YER168C 1641 nt8.23□□□□□ -1.09
RPF1P38805 UGA4YDL210W 1716 nt8.23□□□□□ -1.09
RPF1P38805 ESBP6YNL125C 2022 nt8.22□□□□□ -1.09
RPF1P38805 YGR259CYGR259C 441 nt8.21□□□□□ -1.1
RPF1P38805 YLR154C-GYLR154C-G 150 nt8.21□□□□□ -1.1
RPF1P38805 WSC2YNL283C 1512 nt8.2□□□□□ -1.1
RPF1P38805 PCM1YEL058W 1674 nt8.19□□□□□ -1.1
RPF1P38805 ILV2YMR108W 2064 nt8.18□□□□□ -1.1
RPF1P38805 YHR056W-AYHR056W-A 435 nt8.18□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 28.9 ms