Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 SPT5YML010W 3192 nt14.91□□□□□ -0.02
SSF1P38789 MEP2YNL142W 1500 nt14.88□□□□□ -0.03
SSF1P38789 YLR154C-GYLR154C-G 150 nt14.86□□□□□ -0.03
SSF1P38789 SIS1YNL007C 1059 nt14.84□□□□□ -0.03
SSF1P38789 RPP2AYOL039W 321 nt14.8□□□□□ -0.04
SSF1P38789 YJL152WYJL152W 360 nt14.78□□□□□ -0.04
SSF1P38789 PTP1YDL230W 1008 nt14.67□□□□□ -0.06
SSF1P38789 DSK2YMR276W 1122 nt14.66□□□□□ -0.06
SSF1P38789 DCW1YKL046C 1350 nt14.65□□□□□ -0.06
SSF1P38789 TIR4YOR009W 1464 nt14.64□□□□□ -0.07
SSF1P38789 IMP2'YIL154C 1041 nt14.63□□□□□ -0.07
SSF1P38789 ART5YGR068C 1761 nt14.62□□□□□ -0.07
SSF1P38789 YCH1YGR203W 447 nt14.57□□□□□ -0.08
SSF1P38789 YLR236CYLR236C 324 nt14.57□□□□□ -0.08
SSF1P38789 YPR011CYPR011C 981 nt14.56□□□□□ -0.08
SSF1P38789 FMP45YDL222C 930 nt14.55□□□□□ -0.08
SSF1P38789 PET9YBL030C 957 nt14.55□□□□□ -0.08
SSF1P38789 CAC2YML102W 1407 nt14.55□□□□□ -0.08
SSF1P38789 GFD2YCL036W 1701 nt14.53□□□□□ -0.08
SSF1P38789 IDH1YNL037C 1083 nt14.53□□□□□ -0.08
SSF1P38789 YMR057CYMR057C 372 nt14.51□□□□□ -0.09
SSF1P38789 EMI2YDR516C 1503 nt14.5□□□□□ -0.09
SSF1P38789 YMR090WYMR090W 684 nt14.42□□□□□ -0.1
SSF1P38789 YCL048W-AYCL048W-A 240 nt14.42□□□□□ -0.1
SSF1P38789 YDL221WYDL221W 552 nt14.4□□□□□ -0.1
SSF1P38789 RTS2YOR077W 699 nt14.4□□□□□ -0.1
SSF1P38789 SSA4YER103W 1929 nt14.39□□□□□ -0.11
SSF1P38789 GBP2YCL011C 1284 nt14.39□□□□□ -0.11
SSF1P38789 YDR433WYDR433W 441 nt14.37□□□□□ -0.11
SSF1P38789 LPX1YOR084W 1164 nt14.34□□□□□ -0.11
SSF1P38789 IRC15YPL017C 1500 nt14.32□□□□□ -0.12
SSF1P38789 ERV46YAL042W 1248 nt14.29□□□□□ -0.12
SSF1P38789 FPS1YLL043W 2010 nt14.24□□□□□ -0.13
SSF1P38789 GIS3YLR094C 1509 nt14.24□□□□□ -0.13
SSF1P38789 CUE1YMR264W 612 nt14.22□□□□□ -0.13
SSF1P38789 YKR040CYKR040C 504 nt14.21□□□□□ -0.13
SSF1P38789 MXR2YCL033C 507 nt14.21□□□□□ -0.13
SSF1P38789 TCD2YKL027W 1344 nt14.2□□□□□ -0.14
SSF1P38789 SDH1YKL148C 1923 nt14.17□□□□□ -0.14
SSF1P38789 SCC4YER147C 1875 nt14.14□□□□□ -0.15
SSF1P38789 YBR220CYBR220C 1683 nt14.13□□□□□ -0.15
SSF1P38789 YIL100WYIL100W 354 nt14.11□□□□□ -0.15
SSF1P38789 SPP1YPL138C 1062 nt14.1□□□□□ -0.15
SSF1P38789 RRD1YIL153W 1182 nt14.08□□□□□ -0.16
SSF1P38789 DED1YOR204W 1815 nt14.05□□□□□ -0.16
SSF1P38789 YCL042WYCL042W 360 nt13.95□□□□□ -0.18
SSF1P38789 FRD1YEL047C 1413 nt13.91□□□□□ -0.18
SSF1P38789 FMT1YBL013W 1206 nt13.91□□□□□ -0.18
SSF1P38789 FMP52YER004W 696 nt13.89□□□□□ -0.19
SSF1P38789 YNL195CYNL195C 786 nt13.89□□□□□ -0.19
SSF1P38789 MRPL8YJL063C 717 nt13.87□□□□□ -0.19
SSF1P38789 SOR2YDL246C 1074 nt13.84□□□□□ -0.19
SSF1P38789 SOR1YJR159W 1074 nt13.84□□□□□ -0.19
SSF1P38789 CWP1YKL096W 720 nt13.84□□□□□ -0.19
SSF1P38789 RTG1YOL067C 534 nt13.81□□□□□ -0.2
SSF1P38789 YEL076C-AYEL076C-A 651 nt13.8□□□□□ -0.2
SSF1P38789 YEL076CYEL076C 651 nt13.8□□□□□ -0.2
SSF1P38789 YLR464WYLR464W 651 nt13.8□□□□□ -0.2
SSF1P38789 PTH1YHR189W 573 nt13.78□□□□□ -0.2
SSF1P38789 ADH2YMR303C 1047 nt13.78□□□□□ -0.2
SSF1P38789 RRT12YCR045C 1476 nt13.77□□□□□ -0.21
SSF1P38789 YSC84YHR016C 1407 nt13.77□□□□□ -0.21
SSF1P38789 ADO1YJR105W 1023 nt13.77□□□□□ -0.21
SSF1P38789 BDF1YLR399C 2061 nt13.74□□□□□ -0.21
SSF1P38789 PCM1YEL058W 1674 nt13.72□□□□□ -0.21
SSF1P38789 SNF6YHL025W 999 nt13.7□□□□□ -0.22
SSF1P38789 YLR235CYLR235C 399 nt13.7□□□□□ -0.22
SSF1P38789 YHL050CYHL050C 2094 nt13.67□□□□□ -0.22
SSF1P38789 HUA1YGR268C 597 nt13.64□□□□□ -0.23
SSF1P38789 YKL030WYKL030W 606 nt13.64□□□□□ -0.23
SSF1P38789 SEC11YIR022W 504 nt13.63□□□□□ -0.23
SSF1P38789 TAT1YBR069C 1860 nt13.59□□□□□ -0.23
SSF1P38789 DIC1YLR348C 897 nt13.58□□□□□ -0.24
SSF1P38789 LCB1YMR296C 1677 nt13.57□□□□□ -0.24
SSF1P38789 RNQ1YCL028W 1218 nt13.52□□□□□ -0.25
SSF1P38789 SIM1YIL123W 1431 nt13.51□□□□□ -0.25
SSF1P38789 TIM23YNR017W 669 nt13.51□□□□□ -0.25
SSF1P38789 YIH1YCR059C 777 nt13.5□□□□□ -0.25
SSF1P38789 PCH2YBR186W 1695 nt13.5□□□□□ -0.25
SSF1P38789 YLR179CYLR179C 606 nt13.45□□□□□ -0.26
SSF1P38789 BIO4YNR057C 714 nt13.45□□□□□ -0.26
SSF1P38789 YLL053CYLL053C 459 nt13.42□□□□□ -0.26
SSF1P38789 GUT2YIL155C 1950 nt13.4□□□□□ -0.27
SSF1P38789 UBX6YJL048C 1191 nt13.35□□□□□ -0.27
SSF1P38789 YPR064WYPR064W 420 nt13.35□□□□□ -0.27
SSF1P38789 FTR1YER145C 1215 nt13.32□□□□□ -0.28
SSF1P38789 tL(GAG)GtL(GAG)G 82 nt13.29□□□□□ -0.28
SSF1P38789 GAL1YBR020W 1587 nt13.28□□□□□ -0.28
SSF1P38789 AQY1YPR192W 918 nt13.28□□□□□ -0.28
SSF1P38789 YDR094WYDR094W 336 nt13.27□□□□□ -0.29
SSF1P38789 BOP3YNL042W 1191 nt13.27□□□□□ -0.29
SSF1P38789 TRM5YHR070W 1500 nt13.26□□□□□ -0.29
SSF1P38789 WSC2YNL283C 1512 nt13.26□□□□□ -0.29
SSF1P38789 RTF1YGL244W 1677 nt13.25□□□□□ -0.29
SSF1P38789 ERF2YLR246W 1080 nt13.25□□□□□ -0.29
SSF1P38789 TAD3YLR316C 969 nt13.25□□□□□ -0.29
SSF1P38789 NME1NME1 340 nt13.25□□□□□ -0.29
SSF1P38789 NCP1YHR042W 2076 nt13.24□□□□□ -0.29
SSF1P38789 AHT1YHR093W 549 nt13.24□□□□□ -0.29
SSF1P38789 DDR2YOL052C-A 186 nt13.21□□□□□ -0.29
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms