Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.92□□□□□ -0.181e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)7.47□□□□□ -1.211e-24■■■■■ 54
CSTF2P33240 LRRC75A-AS1-211ENST00000483140 936 ntTSL 26.19□□□□□ -1.421e-24■■■■■ 54
CSTF2P33240 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.41■□□□□ 0.067e-9■■■■■ 53.6
CSTF2P33240 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.61□□□□□ -0.237e-9■■■■■ 53.6
CSTF2P33240 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.989e-8■■■■■ 53.1
CSTF2P33240 CHPT1-203ENST00000546873 624 ntTSL 36.45□□□□□ -1.386e-7■■■■■ 53.1
CSTF2P33240 EHBP1-205ENST00000413434 533 ntTSL 49.18□□□□□ -0.941e-7■■■■■ 52.3
CSTF2P33240 EHBP1-207ENST00000426940 586 ntTSL 47.84□□□□□ -1.151e-7■■■■■ 52.3
CSTF2P33240 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)5.04□□□□□ -1.61e-7■■■■■ 52.3
CSTF2P33240 APLP2-223ENST00000534001 585 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-218ENST00000533532 584 ntTSL 220.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-213ENST00000529701 573 ntTSL 520.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-214ENST00000530132 542 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-217ENST00000533195 560 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-224ENST00000534582 556 ntTSL 520.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-208ENST00000526330 582 ntTSL 320.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-220ENST00000533618 574 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-221ENST00000533713 560 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-209ENST00000527702 579 ntTSL 420.68■□□□□ 0.93e-15■■■■■ 49.6
CSTF2P33240 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.55■□□□□ 0.723e-15■■■■■ 49.6
CSTF2P33240 APLP2-216ENST00000532456 664 ntTSL 419.3■□□□□ 0.683e-15■■■■■ 49.6
CSTF2P33240 APLP2-219ENST00000533616 2041 ntTSL 217.7■□□□□ 0.423e-15■■■■■ 49.6
CSTF2P33240 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.43■□□□□ 0.383e-15■■■■■ 49.6
CSTF2P33240 APLP2-225ENST00000534761 551 ntTSL 516.6■□□□□ 0.253e-15■■■■■ 49.6
CSTF2P33240 APLP2-211ENST00000529235 537 ntTSL 414.48□□□□□ -0.093e-15■■■■■ 49.6
CSTF2P33240 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.233e-15■■■■■ 49.6
CSTF2P33240 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.373e-15■■■■■ 49.6
CSTF2P33240 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.423e-15■■■■■ 49.6
CSTF2P33240 APLP2-206ENST00000525215 478 ntTSL 24.03□□□□□ -1.763e-15■■■■■ 49.6
CSTF2P33240 APLP2-205ENST00000461918 553 ntTSL 33.26□□□□□ -1.893e-15■■■■■ 49.6
CSTF2P33240 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.55□□□□□ -0.242e-10■■■■■ 49.2
CSTF2P33240 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.55□□□□□ -0.242e-10■■■■■ 49.2
CSTF2P33240 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC11.86□□□□□ -0.512e-10■■■■■ 49.2
CSTF2P33240 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC10.75□□□□□ -0.692e-10■■■■■ 49.2
CSTF2P33240 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC8.21□□□□□ -1.12e-10■■■■■ 49.2
CSTF2P33240 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.132e-10■■■■■ 49.2
CSTF2P33240 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.84e-7■■■■■ 49
CSTF2P33240 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.674e-7■■■■■ 49
CSTF2P33240 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.644e-7■■■■■ 49
CSTF2P33240 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)11.91□□□□□ -0.54e-7■■■■■ 49
CSTF2P33240 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.884e-7■■■■■ 49
CSTF2P33240 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)8.81□□□□□ -14e-7■■■■■ 49
CSTF2P33240 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.154e-7■■■■■ 47.4
CSTF2P33240 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.341e-17■■■■■ 47.2
CSTF2P33240 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.85■□□□□ 0.771e-17■■■■■ 47.2
CSTF2P33240 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.62■□□□□ 0.731e-17■■■■■ 47.2
CSTF2P33240 RNASET2-204ENST00000421787 1924 ntTSL 219.02■□□□□ 0.631e-17■■■■■ 47.2
CSTF2P33240 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.25■□□□□ 0.511e-17■■■■■ 47.2
CSTF2P33240 RNASET2-201ENST00000028008 1220 ntTSL 517.77■□□□□ 0.441e-17■■■■■ 47.2
CSTF2P33240 RNASET2-207ENST00000478180 963 ntTSL 517.52■□□□□ 0.41e-17■■■■■ 47.2
CSTF2P33240 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.21e-17■■■■■ 47.2
CSTF2P33240 RNASET2-202ENST00000358165 2445 ntTSL 215.33■□□□□ 0.041e-17■■■■■ 47.2
CSTF2P33240 RNASET2-209ENST00000499370 2164 ntTSL 210.49□□□□□ -0.731e-17■■■■■ 47.2
CSTF2P33240 RNASET2-208ENST00000496851 881 ntTSL 59.44□□□□□ -0.91e-17■■■■■ 47.2
CSTF2P33240 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.551e-17■■■■■ 47.2
CSTF2P33240 PPARG-208ENST00000397023 2002 ntTSL 59.31□□□□□ -0.922e-17■■■■■ 47
CSTF2P33240 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.092e-17■■■■■ 47
CSTF2P33240 PPARG-213ENST00000477039 1705 ntTSL 1 (best)7.81□□□□□ -1.162e-17■■■■■ 47
CSTF2P33240 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.56□□□□□ -1.364e-16■■■■■ 46.8
CSTF2P33240 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.211e-10■■■■■ 46.7
CSTF2P33240 IP6K2-227ENST00000479914 1077 ntTSL 1 (best)16.69■□□□□ 0.263e-7■■■■■ 46.5
CSTF2P33240 IP6K2-220ENST00000449563 580 ntTSL 412.98□□□□□ -0.333e-7■■■■■ 46.5
CSTF2P33240 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.383e-7■■■■■ 46.5
CSTF2P33240 IP6K2-206ENST00000413654 553 ntTSL 412.19□□□□□ -0.463e-7■■■■■ 46.5
CSTF2P33240 IP6K2-224ENST00000454335 631 ntTSL 411.64□□□□□ -0.553e-7■■■■■ 46.5
CSTF2P33240 IP6K2-204ENST00000412850 543 ntTSL 410.35□□□□□ -0.753e-7■■■■■ 46.5
CSTF2P33240 IP6K2-215ENST00000437427 576 ntTSL 49.15□□□□□ -0.943e-7■■■■■ 46.5
CSTF2P33240 IP6K2-217ENST00000443853 579 ntTSL 39.15□□□□□ -0.943e-7■■■■■ 46.5
CSTF2P33240 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.253e-11■■■■■ 46.4
CSTF2P33240 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.193e-11■■■■■ 46.4
CSTF2P33240 RABL6-210ENST00000484471 2746 ntTSL 518.96■□□□□ 0.633e-11■■■■■ 46.4
CSTF2P33240 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.333e-11■■■■■ 46.4
CSTF2P33240 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.213e-11■■■■■ 46.4
CSTF2P33240 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC12.35□□□□□ -0.433e-11■■■■■ 46.4
CSTF2P33240 MGST2-203ENST00000503816 1780 ntTSL 515.56■□□□□ 0.082e-7■■■■■ 46
CSTF2P33240 MGST2-206ENST00000515137 1013 ntTSL 1 (best)8.76□□□□□ -1.012e-7■■■■■ 46
CSTF2P33240 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC8.48□□□□□ -1.052e-7■■■■■ 46
CSTF2P33240 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.25■□□□□ 0.514e-7■■■■■ 46
CSTF2P33240 RBMS1-211ENST00000477486 562 ntTSL 421.82■■□□□ 1.087e-11■■■■■ 45.9
CSTF2P33240 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)16.4■□□□□ 0.227e-11■■■■■ 45.9
CSTF2P33240 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.47e-11■■■■■ 45.9
CSTF2P33240 RBMS1-209ENST00000474820 4016 ntTSL 1 (best)4.62□□□□□ -1.677e-11■■■■■ 45.9
CSTF2P33240 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.43■□□□□ 0.863e-12■■■■■ 45.9
CSTF2P33240 FARP2-216ENST00000478489 617 ntTSL 319.83■□□□□ 0.773e-12■■■■■ 45.9
CSTF2P33240 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.03■□□□□ 0.323e-12■■■■■ 45.9
CSTF2P33240 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.263e-12■■■■■ 45.9
CSTF2P33240 FARP2-209ENST00000464142 442 ntTSL 311.35□□□□□ -0.593e-12■■■■■ 45.9
CSTF2P33240 FARP2-205ENST00000418082 456 ntTSL 410.14□□□□□ -0.793e-12■■■■■ 45.9
CSTF2P33240 FARP2-208ENST00000445489 538 ntTSL 210.02□□□□□ -0.813e-12■■■■■ 45.9
CSTF2P33240 FARP2-210ENST00000467260 471 ntTSL 37.39□□□□□ -1.233e-12■■■■■ 45.9
CSTF2P33240 FARP2-213ENST00000473082 397 ntTSL 34.89□□□□□ -1.633e-12■■■■■ 45.9
CSTF2P33240 NFIA-214ENST00000496712 603 ntTSL 34.04□□□□□ -1.764e-33■■■■■ 45.6
CSTF2P33240 SNHG3-201ENST00000413987 2201 ntTSL 1 (best)9.41□□□□□ -0.98e-46■■■■■ 44.8
CSTF2P33240 ITGB5-202ENST00000460797 2228 ntTSL 211.82□□□□□ -0.521e-16■■■■■ 44.8
CSTF2P33240 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.31□□□□□ -1.882e-16■■■■■ 44.6
CSTF2P33240 PICALM-215ENST00000531558 565 ntTSL 525.13■■□□□ 1.616e-7■■■■■ 44.5
CSTF2P33240 PICALM-218ENST00000532041 699 ntTSL 322.89■■□□□ 1.256e-7■■■■■ 44.5
CSTF2P33240 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.66■■□□□ 1.226e-7■■■■■ 44.5
CSTF2P33240 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.166e-7■■■■■ 44.5
Retrieved 100 of 6,735 protein–RNA pairs in 21.4 ms