Protein–RNA interactions for Protein: P17255

VMA1, V-type proton ATPase catalytic subunit A, yeastyeast

Known RBP Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA1P17255 FUN26YAL022C 1554 nt13.73□□□□□ -0.21
VMA1P17255 TRM9YML014W 840 nt13.71□□□□□ -0.21
VMA1P17255 Q0142Q0142 177 nt13.7□□□□□ -0.22
VMA1P17255 ARA2YMR041C 1008 nt13.62□□□□□ -0.23
VMA1P17255 YPS1YLR120C 1710 nt13.57□□□□□ -0.24
VMA1P17255 CCT6YDR188W 1641 nt13.57□□□□□ -0.24
VMA1P17255 Q0017Q0017 162 nt13.56□□□□□ -0.24
VMA1P17255 ALF1YNL148C 765 nt13.55□□□□□ -0.24
VMA1P17255 YDR095CYDR095C 411 nt13.52□□□□□ -0.25
VMA1P17255 ARP10YDR106W 855 nt13.48□□□□□ -0.25
VMA1P17255 SUF2tP(AGG)C 72 nt13.48□□□□□ -0.25
VMA1P17255 SUF10tP(AGG)N 72 nt13.48□□□□□ -0.25
VMA1P17255 YHR165W-AYHR165W-A 312 nt13.45□□□□□ -0.26
VMA1P17255 YCR099CYCR099C 468 nt13.44□□□□□ -0.26
VMA1P17255 AI3Q0060 1248 nt13.44□□□□□ -0.26
VMA1P17255 SPT5YML010W 3192 nt13.42□□□□□ -0.26
VMA1P17255 YEL009C-AYEL009C-A 408 nt13.39□□□□□ -0.27
VMA1P17255 YLR281CYLR281C 468 nt13.39□□□□□ -0.27
VMA1P17255 YLR122CYLR122C 378 nt13.38□□□□□ -0.27
VMA1P17255 tM(CAU)CtM(CAU)C 72 nt13.37□□□□□ -0.27
VMA1P17255 IMT4tM(CAU)E 72 nt13.37□□□□□ -0.27
VMA1P17255 IMT3tM(CAU)J3 72 nt13.37□□□□□ -0.27
VMA1P17255 IMT1tM(CAU)O1 72 nt13.37□□□□□ -0.27
VMA1P17255 IMT2tM(CAU)P 72 nt13.37□□□□□ -0.27
VMA1P17255 WHI5YOR083W 888 nt13.36□□□□□ -0.27
VMA1P17255 MEP2YNL142W 1500 nt13.35□□□□□ -0.27
VMA1P17255 ABZ2YMR289W 1125 nt13.32□□□□□ -0.28
VMA1P17255 SIS1YNL007C 1059 nt13.3□□□□□ -0.28
VMA1P17255 AI5_BETAQ0075 1065 nt13.29□□□□□ -0.28
VMA1P17255 PUS2YGL063W 1113 nt13.29□□□□□ -0.28
VMA1P17255 YLR154C-GYLR154C-G 150 nt13.28□□□□□ -0.28
VMA1P17255 Q0255Q0255 1419 nt13.28□□□□□ -0.28
VMA1P17255 RPP2AYOL039W 321 nt13.26□□□□□ -0.29
VMA1P17255 PET20YPL159C 762 nt13.26□□□□□ -0.29
VMA1P17255 PTP1YDL230W 1008 nt13.17□□□□□ -0.3
VMA1P17255 YJL152WYJL152W 360 nt13.17□□□□□ -0.3
VMA1P17255 YOR169CYOR169C 465 nt13.16□□□□□ -0.3
VMA1P17255 YGL188CYGL188C 174 nt13.14□□□□□ -0.31
VMA1P17255 DCW1YKL046C 1350 nt13.14□□□□□ -0.31
VMA1P17255 TIR4YOR009W 1464 nt13.13□□□□□ -0.31
VMA1P17255 UTP6YDR449C 1323 nt13.13□□□□□ -0.31
VMA1P17255 DSK2YMR276W 1122 nt13.11□□□□□ -0.31
VMA1P17255 ART5YGR068C 1761 nt13.09□□□□□ -0.31
VMA1P17255 snR78snR78 87 nt13.07□□□□□ -0.32
VMA1P17255 IMP2'YIL154C 1041 nt13.07□□□□□ -0.32
VMA1P17255 YCH1YGR203W 447 nt13.06□□□□□ -0.32
VMA1P17255 YLR236CYLR236C 324 nt13.05□□□□□ -0.32
VMA1P17255 MET8YBR213W 825 nt13.05□□□□□ -0.32
VMA1P17255 GFD2YCL036W 1701 nt13.04□□□□□ -0.32
VMA1P17255 CAC2YML102W 1407 nt13.04□□□□□ -0.32
VMA1P17255 SKG1YKR100C 1068 nt13.03□□□□□ -0.32
VMA1P17255 PET9YBL030C 957 nt13.03□□□□□ -0.32
VMA1P17255 TOM20YGR082W 552 nt13.02□□□□□ -0.33
VMA1P17255 YNR068CYNR068C 819 nt13.01□□□□□ -0.33
VMA1P17255 EMI2YDR516C 1503 nt13□□□□□ -0.33
VMA1P17255 YPR011CYPR011C 981 nt13□□□□□ -0.33
VMA1P17255 FMP45YDL222C 930 nt12.99□□□□□ -0.33
VMA1P17255 IDH1YNL037C 1083 nt12.98□□□□□ -0.33
VMA1P17255 ATP6Q0085 780 nt12.97□□□□□ -0.33
VMA1P17255 CLB6YGR109C 1143 nt12.95□□□□□ -0.34
VMA1P17255 AIR1YIL079C 1083 nt12.95□□□□□ -0.34
VMA1P17255 YMR057CYMR057C 372 nt12.95□□□□□ -0.34
VMA1P17255 SSA4YER103W 1929 nt12.94□□□□□ -0.34
VMA1P17255 YDL221WYDL221W 552 nt12.93□□□□□ -0.34
VMA1P17255 YMR090WYMR090W 684 nt12.91□□□□□ -0.34
VMA1P17255 RTS2YOR077W 699 nt12.9□□□□□ -0.34
VMA1P17255 YPL168WYPL168W 1293 nt12.89□□□□□ -0.35
VMA1P17255 YCL048W-AYCL048W-A 240 nt12.89□□□□□ -0.35
VMA1P17255 IRC15YPL017C 1500 nt12.85□□□□□ -0.35
VMA1P17255 GBP2YCL011C 1284 nt12.85□□□□□ -0.35
VMA1P17255 LCP5YER127W 1074 nt12.84□□□□□ -0.35
VMA1P17255 YDR433WYDR433W 441 nt12.82□□□□□ -0.36
VMA1P17255 HMT1YBR034C 1047 nt12.82□□□□□ -0.36
VMA1P17255 LPX1YOR084W 1164 nt12.81□□□□□ -0.36
VMA1P17255 ERV46YAL042W 1248 nt12.8□□□□□ -0.36
VMA1P17255 YPL071CYPL071C 471 nt12.79□□□□□ -0.36
VMA1P17255 URH1YDR400W 1023 nt12.78□□□□□ -0.36
VMA1P17255 FPS1YLL043W 2010 nt12.77□□□□□ -0.37
VMA1P17255 CUE1YMR264W 612 nt12.76□□□□□ -0.37
VMA1P17255 GIS3YLR094C 1509 nt12.76□□□□□ -0.37
VMA1P17255 KTR3YBR205W 1215 nt12.73□□□□□ -0.37
VMA1P17255 SDH1YKL148C 1923 nt12.72□□□□□ -0.37
VMA1P17255 TCD2YKL027W 1344 nt12.7□□□□□ -0.38
VMA1P17255 MXR2YCL033C 507 nt12.69□□□□□ -0.38
VMA1P17255 YBR220CYBR220C 1683 nt12.69□□□□□ -0.38
VMA1P17255 YKR040CYKR040C 504 nt12.68□□□□□ -0.38
VMA1P17255 SCC4YER147C 1875 nt12.68□□□□□ -0.38
VMA1P17255 URE2YNL229C 1065 nt12.67□□□□□ -0.38
VMA1P17255 NEM1YHR004C 1341 nt12.64□□□□□ -0.39
VMA1P17255 YIL100WYIL100W 354 nt12.62□□□□□ -0.39
VMA1P17255 RRD1YIL153W 1182 nt12.61□□□□□ -0.39
VMA1P17255 DED1YOR204W 1815 nt12.58□□□□□ -0.4
VMA1P17255 SPP1YPL138C 1062 nt12.58□□□□□ -0.4
VMA1P17255 YNL067W-AYNL067W-A 147 nt12.5□□□□□ -0.41
VMA1P17255 YAL016C-BYAL016C-B 186 nt12.49□□□□□ -0.41
VMA1P17255 YHM2YMR241W 945 nt12.49□□□□□ -0.41
VMA1P17255 STD1YOR047C 1335 nt12.47□□□□□ -0.41
VMA1P17255 PHO92YDR374C 921 nt12.47□□□□□ -0.41
VMA1P17255 FRD1YEL047C 1413 nt12.46□□□□□ -0.41
VMA1P17255 FMP52YER004W 696 nt12.46□□□□□ -0.41
Retrieved 100 of 7,029 protein–RNA pairs in 8.8 ms