Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
Tspan6O70401 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.73■■■□□ 2.03
Tspan6O70401 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Tspan6O70401 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Tspan6O70401 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Tspan6O70401 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Tspan6O70401 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.61■■■□□ 2.01
Tspan6O70401 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Tspan6O70401 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.57■■■□□ 2
Tspan6O70401 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Tspan6O70401 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Tspan6O70401 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
Tspan6O70401 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.44■■□□□ 1.98
Tspan6O70401 Gm27322-201ENSMUST00000184007 104 ntBASIC27.43■■□□□ 1.98
Tspan6O70401 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Tspan6O70401 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Tspan6O70401 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Tspan6O70401 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Tspan6O70401 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Tspan6O70401 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.21■■□□□ 1.95
Tspan6O70401 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Tspan6O70401 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Tspan6O70401 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Tspan6O70401 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Tspan6O70401 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.13■■□□□ 1.93
Tspan6O70401 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.11■■□□□ 1.93
Tspan6O70401 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Tspan6O70401 Gm24804-201ENSMUST00000174982 85 ntBASIC27.09■■□□□ 1.93
Tspan6O70401 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Tspan6O70401 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Tspan6O70401 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Tspan6O70401 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Tspan6O70401 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.02■■□□□ 1.92
Tspan6O70401 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.01■■□□□ 1.91
Tspan6O70401 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Tspan6O70401 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Tspan6O70401 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Tspan6O70401 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Tspan6O70401 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Tspan6O70401 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Tspan6O70401 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.88■■□□□ 1.89
Tspan6O70401 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.88■■□□□ 1.89
Tspan6O70401 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.84■■□□□ 1.89
Tspan6O70401 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Tspan6O70401 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Tspan6O70401 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Tspan6O70401 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Tspan6O70401 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Tspan6O70401 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Tspan6O70401 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Tspan6O70401 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Tspan6O70401 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Tspan6O70401 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Tspan6O70401 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Tspan6O70401 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.66■■□□□ 1.86
Tspan6O70401 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Tspan6O70401 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Tspan6O70401 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Tspan6O70401 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Tspan6O70401 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Tspan6O70401 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Tspan6O70401 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.56■■□□□ 1.84
Tspan6O70401 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Tspan6O70401 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Tspan6O70401 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Tspan6O70401 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Tspan6O70401 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.44■■□□□ 1.82
Tspan6O70401 Zfp131-205ENSMUST00000223812 663 ntBASIC26.44■■□□□ 1.82
Tspan6O70401 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Tspan6O70401 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Tspan6O70401 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Tspan6O70401 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Tspan6O70401 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Tspan6O70401 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Tspan6O70401 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Tspan6O70401 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.34■■□□□ 1.81
Tspan6O70401 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tspan6O70401 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Tspan6O70401 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tspan6O70401 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tspan6O70401 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tspan6O70401 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tspan6O70401 Gm16148-201ENSMUST00000119653 893 ntBASIC26.27■■□□□ 1.8
Tspan6O70401 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Tspan6O70401 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tspan6O70401 Mipep-204ENSMUST00000225043 1548 ntBASIC26.25■■□□□ 1.79
Tspan6O70401 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Tspan6O70401 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Tspan6O70401 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tspan6O70401 Peli2-204ENSMUST00000226513 1320 ntBASIC26.22■■□□□ 1.79
Tspan6O70401 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tspan6O70401 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.2■■□□□ 1.78
Tspan6O70401 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.19■■□□□ 1.78
Tspan6O70401 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Tspan6O70401 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Tspan6O70401 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Tspan6O70401 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.17■■□□□ 1.78
Tspan6O70401 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tspan6O70401 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tspan6O70401 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms