Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 YJL152WYJL152W 360 nt13.71□□□□□ -0.21
TY1B-AO13527 YPS1YLR120C 1710 nt13.7□□□□□ -0.22
TY1B-AO13527 YDR095CYDR095C 411 nt13.67□□□□□ -0.22
TY1B-AO13527 YPR011CYPR011C 981 nt13.66□□□□□ -0.22
TY1B-AO13527 YHR165W-AYHR165W-A 312 nt13.63□□□□□ -0.23
TY1B-AO13527 YLR236CYLR236C 324 nt13.63□□□□□ -0.23
TY1B-AO13527 YCH1YGR203W 447 nt13.62□□□□□ -0.23
TY1B-AO13527 NVJ2YPR091C 2313 nt13.61□□□□□ -0.23
TY1B-AO13527 FPS1YLL043W 2010 nt13.59□□□□□ -0.23
TY1B-AO13527 SIS1YNL007C 1059 nt13.58□□□□□ -0.24
TY1B-AO13527 IDH1YNL037C 1083 nt13.54□□□□□ -0.24
TY1B-AO13527 PAC11YDR488C 1602 nt13.47□□□□□ -0.25
TY1B-AO13527 RPP2AYOL039W 321 nt13.47□□□□□ -0.25
TY1B-AO13527 YDR433WYDR433W 441 nt13.43□□□□□ -0.26
TY1B-AO13527 LPX1YOR084W 1164 nt13.43□□□□□ -0.26
TY1B-AO13527 TIR4YOR009W 1464 nt13.42□□□□□ -0.26
TY1B-AO13527 ERV46YAL042W 1248 nt13.39□□□□□ -0.27
TY1B-AO13527 GBP2YCL011C 1284 nt13.38□□□□□ -0.27
TY1B-AO13527 MRPL8YJL063C 717 nt13.37□□□□□ -0.27
TY1B-AO13527 MEP2YNL142W 1500 nt13.34□□□□□ -0.27
TY1B-AO13527 ART5YGR068C 1761 nt13.33□□□□□ -0.28
TY1B-AO13527 YKR040CYKR040C 504 nt13.33□□□□□ -0.28
TY1B-AO13527 PET9YBL030C 957 nt13.32□□□□□ -0.28
TY1B-AO13527 YCL048W-AYCL048W-A 240 nt13.32□□□□□ -0.28
TY1B-AO13527 CAC2YML102W 1407 nt13.3□□□□□ -0.28
TY1B-AO13527 YMR057CYMR057C 372 nt13.3□□□□□ -0.28
TY1B-AO13527 PTP1YDL230W 1008 nt13.27□□□□□ -0.29
TY1B-AO13527 SPP1YPL138C 1062 nt13.27□□□□□ -0.29
TY1B-AO13527 ADO1YJR105W 1023 nt13.26□□□□□ -0.29
TY1B-AO13527 MXR2YCL033C 507 nt13.21□□□□□ -0.29
TY1B-AO13527 GFD2YCL036W 1701 nt13.21□□□□□ -0.3
TY1B-AO13527 TCD2YKL027W 1344 nt13.19□□□□□ -0.3
TY1B-AO13527 YEL076C-AYEL076C-A 651 nt13.18□□□□□ -0.3
TY1B-AO13527 YEL076CYEL076C 651 nt13.18□□□□□ -0.3
TY1B-AO13527 YLR464WYLR464W 651 nt13.18□□□□□ -0.3
TY1B-AO13527 SPT5YML010W 3192 nt13.17□□□□□ -0.3
TY1B-AO13527 Q0182Q0182 405 nt13.15□□□□□ -0.3
TY1B-AO13527 DCW1YKL046C 1350 nt13.11□□□□□ -0.31
TY1B-AO13527 RTG1YOL067C 534 nt13.1□□□□□ -0.31
TY1B-AO13527 SSA4YER103W 1929 nt13.08□□□□□ -0.32
TY1B-AO13527 RTS2YOR077W 699 nt13.04□□□□□ -0.32
TY1B-AO13527 EMI2YDR516C 1503 nt13.02□□□□□ -0.33
TY1B-AO13527 YMR090WYMR090W 684 nt13.01□□□□□ -0.33
TY1B-AO13527 HUA1YGR268C 597 nt13□□□□□ -0.33
TY1B-AO13527 YCL042WYCL042W 360 nt12.97□□□□□ -0.33
TY1B-AO13527 RRD1YIL153W 1182 nt12.95□□□□□ -0.34
TY1B-AO13527 DED1YOR204W 1815 nt12.95□□□□□ -0.34
TY1B-AO13527 YDL221WYDL221W 552 nt12.94□□□□□ -0.34
TY1B-AO13527 FRD1YEL047C 1413 nt12.93□□□□□ -0.34
TY1B-AO13527 UBX6YJL048C 1191 nt12.92□□□□□ -0.34
TY1B-AO13527 CUE1YMR264W 612 nt12.92□□□□□ -0.34
TY1B-AO13527 IRC15YPL017C 1500 nt12.91□□□□□ -0.34
TY1B-AO13527 BDF1YLR399C 2061 nt12.88□□□□□ -0.35
TY1B-AO13527 PTH1YHR189W 573 nt12.86□□□□□ -0.35
TY1B-AO13527 GIS3YLR094C 1509 nt12.85□□□□□ -0.35
TY1B-AO13527 YIL100WYIL100W 354 nt12.85□□□□□ -0.35
TY1B-AO13527 YLR235CYLR235C 399 nt12.84□□□□□ -0.35
TY1B-AO13527 YKL030WYKL030W 606 nt12.81□□□□□ -0.36
TY1B-AO13527 FMT1YBL013W 1206 nt12.81□□□□□ -0.36
TY1B-AO13527 SOR2YDL246C 1074 nt12.79□□□□□ -0.36
TY1B-AO13527 SOR1YJR159W 1074 nt12.79□□□□□ -0.36
TY1B-AO13527 FMP52YER004W 696 nt12.78□□□□□ -0.36
TY1B-AO13527 CWP1YKL096W 720 nt12.76□□□□□ -0.37
TY1B-AO13527 YDR094WYDR094W 336 nt12.74□□□□□ -0.37
TY1B-AO13527 SCC4YER147C 1875 nt12.72□□□□□ -0.37
TY1B-AO13527 SDH1YKL148C 1923 nt12.7□□□□□ -0.38
TY1B-AO13527 LCB1YMR296C 1677 nt12.69□□□□□ -0.38
TY1B-AO13527 ADH2YMR303C 1047 nt12.67□□□□□ -0.38
TY1B-AO13527 TAT1YBR069C 1860 nt12.61□□□□□ -0.39
TY1B-AO13527 SNF6YHL025W 999 nt12.6□□□□□ -0.39
TY1B-AO13527 YNL195CYNL195C 786 nt12.6□□□□□ -0.39
TY1B-AO13527 YBR220CYBR220C 1683 nt12.6□□□□□ -0.39
TY1B-AO13527 PCM1YEL058W 1674 nt12.58□□□□□ -0.4
TY1B-AO13527 TIM23YNR017W 669 nt12.58□□□□□ -0.4
TY1B-AO13527 UME6YDR207C 2511 nt12.57□□□□□ -0.4
TY1B-AO13527 DIC1YLR348C 897 nt12.56□□□□□ -0.4
TY1B-AO13527 YLR179CYLR179C 606 nt12.52□□□□□ -0.41
TY1B-AO13527 tL(GAG)GtL(GAG)G 82 nt12.5□□□□□ -0.41
TY1B-AO13527 YPR064WYPR064W 420 nt12.49□□□□□ -0.41
TY1B-AO13527 RNQ1YCL028W 1218 nt12.47□□□□□ -0.41
TY1B-AO13527 YFL015W-AYFL015W-A 318 nt12.45□□□□□ -0.42
TY1B-AO13527 YIH1YCR059C 777 nt12.42□□□□□ -0.42
TY1B-AO13527 RRT5YFR032C 870 nt12.4□□□□□ -0.42
TY1B-AO13527 TAD3YLR316C 969 nt12.38□□□□□ -0.43
TY1B-AO13527 RRT12YCR045C 1476 nt12.38□□□□□ -0.43
TY1B-AO13527 YFR018CYFR018C 1092 nt12.37□□□□□ -0.43
TY1B-AO13527 PAU16YKL224C 372 nt12.33□□□□□ -0.44
TY1B-AO13527 YSC84YHR016C 1407 nt12.33□□□□□ -0.44
TY1B-AO13527 SIM1YIL123W 1431 nt12.32□□□□□ -0.44
TY1B-AO13527 YLL053CYLL053C 459 nt12.32□□□□□ -0.44
TY1B-AO13527 AHT1YHR093W 549 nt12.31□□□□□ -0.44
TY1B-AO13527 WSC2YNL283C 1512 nt12.29□□□□□ -0.44
TY1B-AO13527 AQY1YPR192W 918 nt12.29□□□□□ -0.44
TY1B-AO13527 BIO4YNR057C 714 nt12.27□□□□□ -0.45
TY1B-AO13527 FTR1YER145C 1215 nt12.26□□□□□ -0.45
TY1B-AO13527 PRE6YOL038W 765 nt12.24□□□□□ -0.45
TY1B-AO13527 YHL050CYHL050C 2094 nt12.23□□□□□ -0.45
TY1B-AO13527 GAL1YBR020W 1587 nt12.22□□□□□ -0.45
TY1B-AO13527 TRM5YHR070W 1500 nt12.18□□□□□ -0.46
TY1B-AO13527 SEC11YIR022W 504 nt12.17□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 58.5 ms