Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.18■■■□□ 2.1
Tnfrsf11bO08712 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tnfrsf11bO08712 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.14■■■□□ 2.1
Tnfrsf11bO08712 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
Tnfrsf11bO08712 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tnfrsf11bO08712 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28■■■□□ 2.07
Tnfrsf11bO08712 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Tnfrsf11bO08712 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Tnfrsf11bO08712 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.92■■■□□ 2.06
Tnfrsf11bO08712 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.86■■■□□ 2.05
Tnfrsf11bO08712 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
Tnfrsf11bO08712 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Tnfrsf11bO08712 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.8■■■□□ 2.04
Tnfrsf11bO08712 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Tnfrsf11bO08712 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Tnfrsf11bO08712 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Tnfrsf11bO08712 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.76■■■□□ 2.03
Tnfrsf11bO08712 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Tnfrsf11bO08712 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Tnfrsf11bO08712 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Tnfrsf11bO08712 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Tnfrsf11bO08712 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Tnfrsf11bO08712 Rab21-202ENSMUST00000218831 843 ntBASIC27.68■■■□□ 2.02
Tnfrsf11bO08712 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Tnfrsf11bO08712 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Tnfrsf11bO08712 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Tnfrsf11bO08712 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.55■■■□□ 2
Tnfrsf11bO08712 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Tnfrsf11bO08712 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.55■■■□□ 2
Tnfrsf11bO08712 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Tnfrsf11bO08712 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Tnfrsf11bO08712 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Tnfrsf11bO08712 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Tnfrsf11bO08712 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.49■■□□□ 1.99
Tnfrsf11bO08712 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.49■■□□□ 1.99
Tnfrsf11bO08712 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Tnfrsf11bO08712 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Tnfrsf11bO08712 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Tnfrsf11bO08712 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.45■■□□□ 1.99
Tnfrsf11bO08712 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Tnfrsf11bO08712 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.41■■□□□ 1.98
Tnfrsf11bO08712 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Tnfrsf11bO08712 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Tnfrsf11bO08712 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Tnfrsf11bO08712 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Tnfrsf11bO08712 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Tnfrsf11bO08712 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Tnfrsf11bO08712 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Tnfrsf11bO08712 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Tnfrsf11bO08712 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.3■■□□□ 1.96
Tnfrsf11bO08712 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.29■■□□□ 1.96
Tnfrsf11bO08712 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Tnfrsf11bO08712 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tnfrsf11bO08712 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Tnfrsf11bO08712 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Tnfrsf11bO08712 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
Tnfrsf11bO08712 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Tnfrsf11bO08712 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Tnfrsf11bO08712 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Tnfrsf11bO08712 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Tnfrsf11bO08712 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Tnfrsf11bO08712 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tnfrsf11bO08712 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tnfrsf11bO08712 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Tnfrsf11bO08712 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Tnfrsf11bO08712 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Tnfrsf11bO08712 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Tnfrsf11bO08712 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.07■■□□□ 1.92
Tnfrsf11bO08712 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Tnfrsf11bO08712 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Tnfrsf11bO08712 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Tnfrsf11bO08712 Gm25262-201ENSMUST00000174934 133 ntBASIC26.97■■□□□ 1.91
Tnfrsf11bO08712 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Tnfrsf11bO08712 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Tnfrsf11bO08712 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Tnfrsf11bO08712 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Tnfrsf11bO08712 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.9■■□□□ 1.9
Tnfrsf11bO08712 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.89■■□□□ 1.9
Tnfrsf11bO08712 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.88■■□□□ 1.89
Tnfrsf11bO08712 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Tnfrsf11bO08712 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Tnfrsf11bO08712 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Tnfrsf11bO08712 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Tnfrsf11bO08712 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Tnfrsf11bO08712 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.76■■□□□ 1.87
Tnfrsf11bO08712 Mipep-204ENSMUST00000225043 1548 ntBASIC26.75■■□□□ 1.87
Tnfrsf11bO08712 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Tnfrsf11bO08712 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Tnfrsf11bO08712 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Tnfrsf11bO08712 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Tnfrsf11bO08712 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Tnfrsf11bO08712 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Tnfrsf11bO08712 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Tnfrsf11bO08712 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Tnfrsf11bO08712 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.62■■□□□ 1.85
Tnfrsf11bO08712 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Tnfrsf11bO08712 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Tnfrsf11bO08712 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.6■■□□□ 1.85
Tnfrsf11bO08712 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.6■■□□□ 1.85
Tnfrsf11bO08712 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 153.7 ms