Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV7A0A075B6U4 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV7A0A075B6U4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV7A0A075B6U4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV7A0A075B6U4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV7A0A075B6U4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV7A0A075B6U4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV7A0A075B6U4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV7A0A075B6U4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV7A0A075B6U4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV7A0A075B6U4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV7A0A075B6U4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV7A0A075B6U4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV7A0A075B6U4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV7A0A075B6U4 AL356512.1-201ENST00000607453 1739 ntBASIC17.3■□□□□ 0.36
TRAV7A0A075B6U4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV7A0A075B6U4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV7A0A075B6U4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV7A0A075B6U4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV7A0A075B6U4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV7A0A075B6U4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV7A0A075B6U4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV7A0A075B6U4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV7A0A075B6U4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV7A0A075B6U4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV7A0A075B6U4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV7A0A075B6U4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV7A0A075B6U4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV7A0A075B6U4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV7A0A075B6U4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV7A0A075B6U4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV7A0A075B6U4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAV7A0A075B6U4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV7A0A075B6U4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV7A0A075B6U4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV7A0A075B6U4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV7A0A075B6U4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV7A0A075B6U4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV7A0A075B6U4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV7A0A075B6U4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV7A0A075B6U4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
TRAV7A0A075B6U4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV7A0A075B6U4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAV7A0A075B6U4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV7A0A075B6U4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV7A0A075B6U4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV7A0A075B6U4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV7A0A075B6U4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV7A0A075B6U4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV7A0A075B6U4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV7A0A075B6U4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRAV7A0A075B6U4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAV7A0A075B6U4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV7A0A075B6U4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAV7A0A075B6U4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV7A0A075B6U4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV7A0A075B6U4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRAV7A0A075B6U4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV7A0A075B6U4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV7A0A075B6U4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV7A0A075B6U4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRAV7A0A075B6U4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV7A0A075B6U4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV7A0A075B6U4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV7A0A075B6U4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV7A0A075B6U4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV7A0A075B6U4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV7A0A075B6U4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV7A0A075B6U4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV7A0A075B6U4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TRAV7A0A075B6U4 AC135731.1-201ENST00000569415 2548 ntBASIC16.95■□□□□ 0.3
TRAV7A0A075B6U4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV7A0A075B6U4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV7A0A075B6U4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV7A0A075B6U4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV7A0A075B6U4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAV7A0A075B6U4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV7A0A075B6U4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV7A0A075B6U4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV7A0A075B6U4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV7A0A075B6U4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV7A0A075B6U4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV7A0A075B6U4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV7A0A075B6U4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV7A0A075B6U4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV7A0A075B6U4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV7A0A075B6U4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV7A0A075B6U4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAV7A0A075B6U4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV7A0A075B6U4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV7A0A075B6U4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV7A0A075B6U4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV7A0A075B6U4 ABCB10P3-201ENST00000561950 2166 ntBASIC16.84■□□□□ 0.29
TRAV7A0A075B6U4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV7A0A075B6U4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV7A0A075B6U4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV7A0A075B6U4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV7A0A075B6U4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRAV7A0A075B6U4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV7A0A075B6U4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms