Protein–RNA interactions for Protein: Q9Z2V6

Hdac5, Histone deacetylase 5, mousemouse

Predictions only

Length 1,113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac5Q9Z2V6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Hdac5Q9Z2V6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC30.6■■■□□ 2.49
Hdac5Q9Z2V6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Hdac5Q9Z2V6 Gm13241-201ENSMUST00000094493 780 ntBASIC30.6■■■□□ 2.49
Hdac5Q9Z2V6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Hdac5Q9Z2V6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC30.59■■■□□ 2.49
Hdac5Q9Z2V6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Hdac5Q9Z2V6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Hdac5Q9Z2V6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Hdac5Q9Z2V6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
Hdac5Q9Z2V6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Hdac5Q9Z2V6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Hdac5Q9Z2V6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Hdac5Q9Z2V6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC30.57■■■□□ 2.48
Hdac5Q9Z2V6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC30.57■■■□□ 2.48
Hdac5Q9Z2V6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Hdac5Q9Z2V6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Hdac5Q9Z2V6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Hdac5Q9Z2V6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Hdac5Q9Z2V6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Hdac5Q9Z2V6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Hdac5Q9Z2V6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC30.55■■■□□ 2.48
Hdac5Q9Z2V6 Gm12922-201ENSMUST00000120626 809 ntBASIC30.55■■■□□ 2.48
Hdac5Q9Z2V6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Hdac5Q9Z2V6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Hdac5Q9Z2V6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Hdac5Q9Z2V6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Hdac5Q9Z2V6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hdac5Q9Z2V6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hdac5Q9Z2V6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hdac5Q9Z2V6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hdac5Q9Z2V6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hdac5Q9Z2V6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Hdac5Q9Z2V6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Hdac5Q9Z2V6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
Hdac5Q9Z2V6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Hdac5Q9Z2V6 Gm9847-201ENSMUST00000052528 599 ntBASIC30.53■■■□□ 2.48
Hdac5Q9Z2V6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Hdac5Q9Z2V6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC30.53■■■□□ 2.48
Hdac5Q9Z2V6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
Hdac5Q9Z2V6 Gm10620-201ENSMUST00000098379 1332 ntBASIC30.52■■■□□ 2.48
Hdac5Q9Z2V6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Hdac5Q9Z2V6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Hdac5Q9Z2V6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Hdac5Q9Z2V6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Hdac5Q9Z2V6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
Hdac5Q9Z2V6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Hdac5Q9Z2V6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC30.51■■■□□ 2.47
Hdac5Q9Z2V6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Hdac5Q9Z2V6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Hdac5Q9Z2V6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Hdac5Q9Z2V6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Hdac5Q9Z2V6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Hdac5Q9Z2V6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Hdac5Q9Z2V6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Hdac5Q9Z2V6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Hdac5Q9Z2V6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
Hdac5Q9Z2V6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Hdac5Q9Z2V6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
Hdac5Q9Z2V6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Hdac5Q9Z2V6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Hdac5Q9Z2V6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Hdac5Q9Z2V6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC30.48■■■□□ 2.47
Hdac5Q9Z2V6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC30.48■■■□□ 2.47
Hdac5Q9Z2V6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Hdac5Q9Z2V6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Hdac5Q9Z2V6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Hdac5Q9Z2V6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC30.47■■■□□ 2.47
Hdac5Q9Z2V6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Hdac5Q9Z2V6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Hdac5Q9Z2V6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC30.46■■■□□ 2.47
Hdac5Q9Z2V6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Hdac5Q9Z2V6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Hdac5Q9Z2V6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
Hdac5Q9Z2V6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC30.45■■■□□ 2.47
Hdac5Q9Z2V6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC30.45■■■□□ 2.47
Hdac5Q9Z2V6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Hdac5Q9Z2V6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Hdac5Q9Z2V6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC30.44■■■□□ 2.46
Hdac5Q9Z2V6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Hdac5Q9Z2V6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
Hdac5Q9Z2V6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Hdac5Q9Z2V6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Hdac5Q9Z2V6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Hdac5Q9Z2V6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
Hdac5Q9Z2V6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Hdac5Q9Z2V6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC30.42■■■□□ 2.46
Hdac5Q9Z2V6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Hdac5Q9Z2V6 Gm43034-201ENSMUST00000198678 1364 ntBASIC30.41■■■□□ 2.46
Hdac5Q9Z2V6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Hdac5Q9Z2V6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Hdac5Q9Z2V6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Hdac5Q9Z2V6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Hdac5Q9Z2V6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Hdac5Q9Z2V6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC30.4■■■□□ 2.46
Hdac5Q9Z2V6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC30.4■■■□□ 2.46
Hdac5Q9Z2V6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Hdac5Q9Z2V6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Hdac5Q9Z2V6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Hdac5Q9Z2V6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms