Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 RPS2P7-201ENST00000447334 885 ntBASIC20.25■□□□□ 0.83
TREM2Q9NZC2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREM2Q9NZC2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 YBX1P4-201ENST00000392794 808 ntBASIC20.24■□□□□ 0.83
TREM2Q9NZC2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREM2Q9NZC2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.23■□□□□ 0.83
TREM2Q9NZC2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREM2Q9NZC2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREM2Q9NZC2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREM2Q9NZC2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.23■□□□□ 0.83
TREM2Q9NZC2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TREM2Q9NZC2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREM2Q9NZC2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.22■□□□□ 0.83
TREM2Q9NZC2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.22■□□□□ 0.83
TREM2Q9NZC2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TREM2Q9NZC2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.22■□□□□ 0.83
TREM2Q9NZC2 AC087393.1-201ENST00000582896 145 ntBASIC20.22■□□□□ 0.83
TREM2Q9NZC2 AL451085.2-201ENST00000605085 799 ntBASIC20.22■□□□□ 0.83
TREM2Q9NZC2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
TREM2Q9NZC2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TREM2Q9NZC2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TREM2Q9NZC2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
TREM2Q9NZC2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TREM2Q9NZC2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.21■□□□□ 0.83
TREM2Q9NZC2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TREM2Q9NZC2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.21■□□□□ 0.83
TREM2Q9NZC2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TREM2Q9NZC2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.21■□□□□ 0.83
TREM2Q9NZC2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.21■□□□□ 0.83
TREM2Q9NZC2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TREM2Q9NZC2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.21■□□□□ 0.83
TREM2Q9NZC2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TREM2Q9NZC2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 AC103834.1-201ENST00000520383 144 ntBASIC20.2■□□□□ 0.82
TREM2Q9NZC2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TREM2Q9NZC2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TREM2Q9NZC2 AC096887.2-201ENST00000623443 1957 ntBASIC20.19■□□□□ 0.82
TREM2Q9NZC2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TREM2Q9NZC2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.19■□□□□ 0.82
TREM2Q9NZC2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TREM2Q9NZC2 AL035685.1-201ENST00000636663 812 ntBASIC20.19■□□□□ 0.82
TREM2Q9NZC2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TREM2Q9NZC2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TREM2Q9NZC2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.18■□□□□ 0.82
TREM2Q9NZC2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.18■□□□□ 0.82
TREM2Q9NZC2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TREM2Q9NZC2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.18■□□□□ 0.82
TREM2Q9NZC2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TREM2Q9NZC2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREM2Q9NZC2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREM2Q9NZC2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.17■□□□□ 0.82
TREM2Q9NZC2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TREM2Q9NZC2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TREM2Q9NZC2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.17■□□□□ 0.82
TREM2Q9NZC2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TREM2Q9NZC2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TREM2Q9NZC2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TREM2Q9NZC2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TREM2Q9NZC2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TREM2Q9NZC2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TREM2Q9NZC2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TREM2Q9NZC2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TREM2Q9NZC2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.16■□□□□ 0.82
TREM2Q9NZC2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TREM2Q9NZC2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TREM2Q9NZC2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.16■□□□□ 0.82
TREM2Q9NZC2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.15■□□□□ 0.82
TREM2Q9NZC2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TREM2Q9NZC2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TREM2Q9NZC2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms