Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PARPBPQ9NWS1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 AC022616.5-201ENST00000518796 181 ntBASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 AC010980.1-201ENST00000587192 1142 ntBASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.03■□□□□ 0.96
PARPBPQ9NWS1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PARPBPQ9NWS1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PARPBPQ9NWS1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PARPBPQ9NWS1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PARPBPQ9NWS1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PARPBPQ9NWS1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21■□□□□ 0.95
PARPBPQ9NWS1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
PARPBPQ9NWS1 AL592295.1-201ENST00000400984 884 ntBASIC21■□□□□ 0.95
PARPBPQ9NWS1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21■□□□□ 0.95
PARPBPQ9NWS1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PARPBPQ9NWS1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PARPBPQ9NWS1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 YBX1P4-201ENST00000392794 808 ntBASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PARPBPQ9NWS1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 FOXO3B-201ENST00000395675 1928 ntBASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.97■□□□□ 0.95
PARPBPQ9NWS1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
PARPBPQ9NWS1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 MIR4508-201ENST00000584178 70 ntBASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 PVT1_1.1-201ENST00000615125 194 ntBASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.95■□□□□ 0.94
PARPBPQ9NWS1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PARPBPQ9NWS1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PARPBPQ9NWS1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PARPBPQ9NWS1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PARPBPQ9NWS1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.93■□□□□ 0.94
PARPBPQ9NWS1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PARPBPQ9NWS1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PARPBPQ9NWS1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARPBPQ9NWS1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARPBPQ9NWS1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PARPBPQ9NWS1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms