Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 AC126177.7-201ENST00000547904 679 ntBASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP1R3EQ9H7J1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP1R3EQ9H7J1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP1R3EQ9H7J1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.86■□□□□ 0.93
PPP1R3EQ9H7J1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.86■□□□□ 0.93
PPP1R3EQ9H7J1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPP1R3EQ9H7J1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.85■□□□□ 0.93
PPP1R3EQ9H7J1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP1R3EQ9H7J1 MIR4449-201ENST00000578365 66 ntBASIC20.85■□□□□ 0.93
PPP1R3EQ9H7J1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP1R3EQ9H7J1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP1R3EQ9H7J1 AP003733.4-201ENST00000623785 1697 ntBASIC20.85■□□□□ 0.93
PPP1R3EQ9H7J1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
PPP1R3EQ9H7J1 DUSP8P5-201ENST00000422884 1815 ntBASIC20.85■□□□□ 0.93
PPP1R3EQ9H7J1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.85■□□□□ 0.93
PPP1R3EQ9H7J1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP1R3EQ9H7J1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP1R3EQ9H7J1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP1R3EQ9H7J1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP1R3EQ9H7J1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP1R3EQ9H7J1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP1R3EQ9H7J1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP1R3EQ9H7J1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PPP1R3EQ9H7J1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PPP1R3EQ9H7J1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PPP1R3EQ9H7J1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.83■□□□□ 0.93
PPP1R3EQ9H7J1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PPP1R3EQ9H7J1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PPP1R3EQ9H7J1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PPP1R3EQ9H7J1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PPP1R3EQ9H7J1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PPP1R3EQ9H7J1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.82■□□□□ 0.92
PPP1R3EQ9H7J1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PPP1R3EQ9H7J1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PPP1R3EQ9H7J1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PPP1R3EQ9H7J1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PPP1R3EQ9H7J1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PPP1R3EQ9H7J1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PPP1R3EQ9H7J1 AC022413.1-201ENST00000624602 984 ntBASIC20.81■□□□□ 0.92
PPP1R3EQ9H7J1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PPP1R3EQ9H7J1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PPP1R3EQ9H7J1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.81■□□□□ 0.92
PPP1R3EQ9H7J1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PPP1R3EQ9H7J1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PPP1R3EQ9H7J1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP1R3EQ9H7J1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP1R3EQ9H7J1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP1R3EQ9H7J1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PPP1R3EQ9H7J1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP1R3EQ9H7J1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.8■□□□□ 0.92
PPP1R3EQ9H7J1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PPP1R3EQ9H7J1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.79■□□□□ 0.92
PPP1R3EQ9H7J1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 AC092296.2-201ENST00000589470 999 ntBASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPP1R3EQ9H7J1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP1R3EQ9H7J1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.77■□□□□ 0.92
PPP1R3EQ9H7J1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP1R3EQ9H7J1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP1R3EQ9H7J1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP1R3EQ9H7J1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PPP1R3EQ9H7J1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PPP1R3EQ9H7J1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP1R3EQ9H7J1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPP1R3EQ9H7J1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PPP1R3EQ9H7J1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PPP1R3EQ9H7J1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPP1R3EQ9H7J1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms