Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.01■□□□□ 0.79
Hmgn3Q9DCB1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Hmgn3Q9DCB1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hmgn3Q9DCB1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20■□□□□ 0.79
Hmgn3Q9DCB1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn3Q9DCB1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmgn3Q9DCB1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hmgn3Q9DCB1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Hmgn3Q9DCB1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hmgn3Q9DCB1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hmgn3Q9DCB1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.98■□□□□ 0.79
Hmgn3Q9DCB1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn3Q9DCB1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.98■□□□□ 0.79
Hmgn3Q9DCB1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hmgn3Q9DCB1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn3Q9DCB1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn3Q9DCB1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn3Q9DCB1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn3Q9DCB1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn3Q9DCB1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn3Q9DCB1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hmgn3Q9DCB1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgn3Q9DCB1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgn3Q9DCB1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgn3Q9DCB1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgn3Q9DCB1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.96■□□□□ 0.79
Hmgn3Q9DCB1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgn3Q9DCB1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hmgn3Q9DCB1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hmgn3Q9DCB1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgn3Q9DCB1 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.95■□□□□ 0.78
Hmgn3Q9DCB1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgn3Q9DCB1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgn3Q9DCB1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgn3Q9DCB1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.94■□□□□ 0.78
Hmgn3Q9DCB1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgn3Q9DCB1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgn3Q9DCB1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgn3Q9DCB1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgn3Q9DCB1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgn3Q9DCB1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.93■□□□□ 0.78
Hmgn3Q9DCB1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgn3Q9DCB1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hmgn3Q9DCB1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn3Q9DCB1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hmgn3Q9DCB1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn3Q9DCB1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hmgn3Q9DCB1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hmgn3Q9DCB1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn3Q9DCB1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn3Q9DCB1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Hmgn3Q9DCB1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn3Q9DCB1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn3Q9DCB1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn3Q9DCB1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.91■□□□□ 0.78
Hmgn3Q9DCB1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn3Q9DCB1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Hmgn3Q9DCB1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn3Q9DCB1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.9■□□□□ 0.78
Hmgn3Q9DCB1 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.9■□□□□ 0.78
Hmgn3Q9DCB1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn3Q9DCB1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn3Q9DCB1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Hmgn3Q9DCB1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn3Q9DCB1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn3Q9DCB1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn3Q9DCB1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn3Q9DCB1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.89■□□□□ 0.77
Hmgn3Q9DCB1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Hmgn3Q9DCB1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hmgn3Q9DCB1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Hmgn3Q9DCB1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hmgn3Q9DCB1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.88■□□□□ 0.77
Hmgn3Q9DCB1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn3Q9DCB1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn3Q9DCB1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn3Q9DCB1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn3Q9DCB1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn3Q9DCB1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn3Q9DCB1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn3Q9DCB1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.87■□□□□ 0.77
Hmgn3Q9DCB1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms