Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20aQ9DC33 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20aQ9DC33 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20aQ9DC33 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hmg20aQ9DC33 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Hmg20aQ9DC33 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hmg20aQ9DC33 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hmg20aQ9DC33 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hmg20aQ9DC33 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20aQ9DC33 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20aQ9DC33 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20aQ9DC33 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hmg20aQ9DC33 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmg20aQ9DC33 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.38■□□□□ 0.69
Hmg20aQ9DC33 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Hmg20aQ9DC33 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hmg20aQ9DC33 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hmg20aQ9DC33 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmg20aQ9DC33 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmg20aQ9DC33 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmg20aQ9DC33 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmg20aQ9DC33 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hmg20aQ9DC33 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmg20aQ9DC33 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Hmg20aQ9DC33 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmg20aQ9DC33 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmg20aQ9DC33 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Hmg20aQ9DC33 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.36■□□□□ 0.69
Hmg20aQ9DC33 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmg20aQ9DC33 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmg20aQ9DC33 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmg20aQ9DC33 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmg20aQ9DC33 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmg20aQ9DC33 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmg20aQ9DC33 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmg20aQ9DC33 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.35■□□□□ 0.69
Hmg20aQ9DC33 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.35■□□□□ 0.69
Hmg20aQ9DC33 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmg20aQ9DC33 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmg20aQ9DC33 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmg20aQ9DC33 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.34■□□□□ 0.69
Hmg20aQ9DC33 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmg20aQ9DC33 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmg20aQ9DC33 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Hmg20aQ9DC33 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmg20aQ9DC33 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmg20aQ9DC33 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.33■□□□□ 0.68
Hmg20aQ9DC33 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Hmg20aQ9DC33 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmg20aQ9DC33 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Hmg20aQ9DC33 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20aQ9DC33 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hmg20aQ9DC33 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmg20aQ9DC33 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20aQ9DC33 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmg20aQ9DC33 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hmg20aQ9DC33 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20aQ9DC33 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Hmg20aQ9DC33 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20aQ9DC33 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Hmg20aQ9DC33 Gm22567-201ENSMUST00000175542 342 ntBASIC19.28■□□□□ 0.68
Hmg20aQ9DC33 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20aQ9DC33 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmg20aQ9DC33 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hmg20aQ9DC33 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20aQ9DC33 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20aQ9DC33 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20aQ9DC33 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hmg20aQ9DC33 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.27■□□□□ 0.68
Hmg20aQ9DC33 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmg20aQ9DC33 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hmg20aQ9DC33 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hmg20aQ9DC33 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmg20aQ9DC33 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmg20aQ9DC33 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmg20aQ9DC33 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hmg20aQ9DC33 Nkain2-201ENSMUST00000092602 558 ntBASIC19.26■□□□□ 0.67
Hmg20aQ9DC33 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms