Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sec61bQ9CQS8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sec61bQ9CQS8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC11.39□□□□□ -0.59
Sec61bQ9CQS8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sec61bQ9CQS8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sec61bQ9CQS8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sec61bQ9CQS8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Gm12922-201ENSMUST00000120626 809 ntBASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Gm8093-201ENSMUST00000128935 1892 ntBASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC11.35□□□□□ -0.59
Sec61bQ9CQS8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.34□□□□□ -0.59
Sec61bQ9CQS8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms