Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
USB1Q9BQ65 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
USB1Q9BQ65 AL592295.1-201ENST00000400984 884 ntBASIC20.86■□□□□ 0.93
USB1Q9BQ65 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.86■□□□□ 0.93
USB1Q9BQ65 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USB1Q9BQ65 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
USB1Q9BQ65 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.86■□□□□ 0.93
USB1Q9BQ65 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USB1Q9BQ65 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USB1Q9BQ65 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.86■□□□□ 0.93
USB1Q9BQ65 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USB1Q9BQ65 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
USB1Q9BQ65 KRT18P24-201ENST00000344739 1156 ntBASIC20.85■□□□□ 0.93
USB1Q9BQ65 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
USB1Q9BQ65 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.85■□□□□ 0.93
USB1Q9BQ65 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.85■□□□□ 0.93
USB1Q9BQ65 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.85■□□□□ 0.93
USB1Q9BQ65 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USB1Q9BQ65 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USB1Q9BQ65 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.84■□□□□ 0.93
USB1Q9BQ65 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USB1Q9BQ65 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USB1Q9BQ65 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USB1Q9BQ65 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USB1Q9BQ65 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.84■□□□□ 0.93
USB1Q9BQ65 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USB1Q9BQ65 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USB1Q9BQ65 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
USB1Q9BQ65 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USB1Q9BQ65 AC009299.2-201ENST00000482477 511 ntBASIC20.83■□□□□ 0.93
USB1Q9BQ65 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
USB1Q9BQ65 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USB1Q9BQ65 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.82■□□□□ 0.92
USB1Q9BQ65 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USB1Q9BQ65 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.82■□□□□ 0.92
USB1Q9BQ65 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USB1Q9BQ65 Z92544.1-202ENST00000571933 1220 ntBASIC20.82■□□□□ 0.92
USB1Q9BQ65 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USB1Q9BQ65 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USB1Q9BQ65 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.81■□□□□ 0.92
USB1Q9BQ65 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USB1Q9BQ65 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
USB1Q9BQ65 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USB1Q9BQ65 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.81■□□□□ 0.92
USB1Q9BQ65 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.81■□□□□ 0.92
USB1Q9BQ65 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.81■□□□□ 0.92
USB1Q9BQ65 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USB1Q9BQ65 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USB1Q9BQ65 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USB1Q9BQ65 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
USB1Q9BQ65 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USB1Q9BQ65 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USB1Q9BQ65 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
USB1Q9BQ65 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.8■□□□□ 0.92
USB1Q9BQ65 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
USB1Q9BQ65 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USB1Q9BQ65 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
USB1Q9BQ65 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USB1Q9BQ65 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
USB1Q9BQ65 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USB1Q9BQ65 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.79■□□□□ 0.92
USB1Q9BQ65 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USB1Q9BQ65 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USB1Q9BQ65 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USB1Q9BQ65 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USB1Q9BQ65 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USB1Q9BQ65 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.78■□□□□ 0.92
USB1Q9BQ65 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USB1Q9BQ65 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USB1Q9BQ65 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.78■□□□□ 0.92
USB1Q9BQ65 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USB1Q9BQ65 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USB1Q9BQ65 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USB1Q9BQ65 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USB1Q9BQ65 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
USB1Q9BQ65 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
USB1Q9BQ65 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USB1Q9BQ65 THA1P-201ENST00000590384 1145 ntBASIC20.77■□□□□ 0.92
USB1Q9BQ65 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
USB1Q9BQ65 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USB1Q9BQ65 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.77■□□□□ 0.92
USB1Q9BQ65 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USB1Q9BQ65 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USB1Q9BQ65 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
USB1Q9BQ65 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USB1Q9BQ65 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USB1Q9BQ65 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.76■□□□□ 0.91
USB1Q9BQ65 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
USB1Q9BQ65 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USB1Q9BQ65 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.76■□□□□ 0.91
USB1Q9BQ65 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USB1Q9BQ65 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.75■□□□□ 0.91
USB1Q9BQ65 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USB1Q9BQ65 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USB1Q9BQ65 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
USB1Q9BQ65 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
USB1Q9BQ65 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.75■□□□□ 0.91
USB1Q9BQ65 AC011551.1-201ENST00000614101 683 ntBASIC20.75■□□□□ 0.91
USB1Q9BQ65 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USB1Q9BQ65 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms