Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.78■■□□□ 1.88
Rtn4Q99P72 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.78■■□□□ 1.88
Rtn4Q99P72 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Rtn4Q99P72 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Rtn4Q99P72 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rtn4Q99P72 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rtn4Q99P72 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.77■■□□□ 1.88
Rtn4Q99P72 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rtn4Q99P72 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rtn4Q99P72 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC26.76■■□□□ 1.88
Rtn4Q99P72 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rtn4Q99P72 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC26.76■■□□□ 1.87
Rtn4Q99P72 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rtn4Q99P72 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
Rtn4Q99P72 Gm15039-201ENSMUST00000118914 875 ntBASIC26.75■■□□□ 1.87
Rtn4Q99P72 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rtn4Q99P72 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rtn4Q99P72 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rtn4Q99P72 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rtn4Q99P72 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Rtn4Q99P72 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Rtn4Q99P72 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Rtn4Q99P72 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.74■■□□□ 1.87
Rtn4Q99P72 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rtn4Q99P72 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Rtn4Q99P72 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.74■■□□□ 1.87
Rtn4Q99P72 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Rtn4Q99P72 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rtn4Q99P72 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rtn4Q99P72 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.73■■□□□ 1.87
Rtn4Q99P72 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.73■■□□□ 1.87
Rtn4Q99P72 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rtn4Q99P72 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rtn4Q99P72 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.72■■□□□ 1.87
Rtn4Q99P72 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.72■■□□□ 1.87
Rtn4Q99P72 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Rtn4Q99P72 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.72■■□□□ 1.87
Rtn4Q99P72 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Rtn4Q99P72 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rtn4Q99P72 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rtn4Q99P72 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Rtn4Q99P72 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rtn4Q99P72 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.71■■□□□ 1.87
Rtn4Q99P72 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC26.7■■□□□ 1.87
Rtn4Q99P72 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rtn4Q99P72 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rtn4Q99P72 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
Rtn4Q99P72 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rtn4Q99P72 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Rtn4Q99P72 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.7■■□□□ 1.86
Rtn4Q99P72 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rtn4Q99P72 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rtn4Q99P72 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.69■■□□□ 1.86
Rtn4Q99P72 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rtn4Q99P72 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rtn4Q99P72 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rtn4Q99P72 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.68■■□□□ 1.86
Rtn4Q99P72 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rtn4Q99P72 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rtn4Q99P72 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.67■■□□□ 1.86
Rtn4Q99P72 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.67■■□□□ 1.86
Rtn4Q99P72 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rtn4Q99P72 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rtn4Q99P72 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC26.66■■□□□ 1.86
Rtn4Q99P72 Gm5131-201ENSMUST00000212776 1238 ntBASIC26.66■■□□□ 1.86
Rtn4Q99P72 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Rtn4Q99P72 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rtn4Q99P72 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Rtn4Q99P72 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rtn4Q99P72 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC26.65■■□□□ 1.86
Rtn4Q99P72 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rtn4Q99P72 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Rtn4Q99P72 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Rtn4Q99P72 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rtn4Q99P72 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Rtn4Q99P72 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Rtn4Q99P72 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Rtn4Q99P72 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtn4Q99P72 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtn4Q99P72 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Rtn4Q99P72 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtn4Q99P72 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtn4Q99P72 Gm7417-201ENSMUST00000192950 473 ntBASIC26.63■■□□□ 1.85
Rtn4Q99P72 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtn4Q99P72 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Rtn4Q99P72 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Rtn4Q99P72 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC26.62■■□□□ 1.85
Rtn4Q99P72 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC26.62■■□□□ 1.85
Rtn4Q99P72 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rtn4Q99P72 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26.61■■□□□ 1.85
Rtn4Q99P72 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn4Q99P72 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn4Q99P72 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn4Q99P72 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn4Q99P72 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
Rtn4Q99P72 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn4Q99P72 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rtn4Q99P72 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rtn4Q99P72 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rtn4Q99P72 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.6■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms