Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.28■□□□□ 0.84
Nck1Q99M51 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nck1Q99M51 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nck1Q99M51 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Nck1Q99M51 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nck1Q99M51 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nck1Q99M51 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nck1Q99M51 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nck1Q99M51 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nck1Q99M51 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nck1Q99M51 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Nck1Q99M51 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nck1Q99M51 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nck1Q99M51 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nck1Q99M51 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nck1Q99M51 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nck1Q99M51 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nck1Q99M51 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Nck1Q99M51 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nck1Q99M51 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nck1Q99M51 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nck1Q99M51 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nck1Q99M51 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nck1Q99M51 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.25■□□□□ 0.83
Nck1Q99M51 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Nck1Q99M51 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nck1Q99M51 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.24■□□□□ 0.83
Nck1Q99M51 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.24■□□□□ 0.83
Nck1Q99M51 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
Nck1Q99M51 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nck1Q99M51 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nck1Q99M51 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nck1Q99M51 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nck1Q99M51 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nck1Q99M51 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.23■□□□□ 0.83
Nck1Q99M51 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nck1Q99M51 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nck1Q99M51 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nck1Q99M51 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nck1Q99M51 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nck1Q99M51 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nck1Q99M51 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nck1Q99M51 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nck1Q99M51 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nck1Q99M51 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nck1Q99M51 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Nck1Q99M51 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.21■□□□□ 0.83
Nck1Q99M51 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.21■□□□□ 0.83
Nck1Q99M51 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.21■□□□□ 0.83
Nck1Q99M51 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.21■□□□□ 0.83
Nck1Q99M51 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nck1Q99M51 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Nck1Q99M51 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nck1Q99M51 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nck1Q99M51 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nck1Q99M51 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nck1Q99M51 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nck1Q99M51 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nck1Q99M51 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.19■□□□□ 0.82
Nck1Q99M51 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nck1Q99M51 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nck1Q99M51 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nck1Q99M51 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nck1Q99M51 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nck1Q99M51 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nck1Q99M51 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nck1Q99M51 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.19■□□□□ 0.82
Nck1Q99M51 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nck1Q99M51 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nck1Q99M51 Gm7432-201ENSMUST00000210343 879 ntBASIC20.18■□□□□ 0.82
Nck1Q99M51 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nck1Q99M51 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nck1Q99M51 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nck1Q99M51 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nck1Q99M51 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nck1Q99M51 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nck1Q99M51 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nck1Q99M51 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.17■□□□□ 0.82
Nck1Q99M51 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nck1Q99M51 Gm11599-201ENSMUST00000118720 878 ntBASIC20.16■□□□□ 0.82
Nck1Q99M51 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nck1Q99M51 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nck1Q99M51 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nck1Q99M51 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nck1Q99M51 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nck1Q99M51 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nck1Q99M51 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nck1Q99M51 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nck1Q99M51 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nck1Q99M51 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nck1Q99M51 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms