Protein–RNA interactions for Protein: Q99439

CNN2, Calponin-2, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2Q99439 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CNN2Q99439 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CNN2Q99439 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.01■□□□□ 0.95
CNN2Q99439 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNN2Q99439 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNN2Q99439 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNN2Q99439 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNN2Q99439 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.01■□□□□ 0.95
CNN2Q99439 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.01■□□□□ 0.95
CNN2Q99439 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNN2Q99439 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNN2Q99439 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNN2Q99439 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNN2Q99439 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNN2Q99439 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CNN2Q99439 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21■□□□□ 0.95
CNN2Q99439 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
CNN2Q99439 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CNN2Q99439 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNN2Q99439 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CNN2Q99439 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNN2Q99439 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNN2Q99439 AC060814.1-201ENST00000554326 538 ntBASIC20.99■□□□□ 0.95
CNN2Q99439 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.99■□□□□ 0.95
CNN2Q99439 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.99■□□□□ 0.95
CNN2Q99439 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNN2Q99439 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNN2Q99439 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNN2Q99439 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNN2Q99439 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CNN2Q99439 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNN2Q99439 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.98■□□□□ 0.95
CNN2Q99439 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNN2Q99439 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNN2Q99439 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNN2Q99439 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNN2Q99439 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNN2Q99439 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.97■□□□□ 0.95
CNN2Q99439 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.97■□□□□ 0.95
CNN2Q99439 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNN2Q99439 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.97■□□□□ 0.95
CNN2Q99439 SMPD5-203ENST00000639008 1464 ntBASIC20.97■□□□□ 0.95
CNN2Q99439 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNN2Q99439 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.97■□□□□ 0.95
CNN2Q99439 MIR6089-201ENST00000616698 64 ntBASIC20.97■□□□□ 0.95
CNN2Q99439 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNN2Q99439 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNN2Q99439 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.97■□□□□ 0.95
CNN2Q99439 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.97■□□□□ 0.95
CNN2Q99439 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.96■□□□□ 0.95
CNN2Q99439 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNN2Q99439 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNN2Q99439 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNN2Q99439 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNN2Q99439 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNN2Q99439 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.95■□□□□ 0.94
CNN2Q99439 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNN2Q99439 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNN2Q99439 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNN2Q99439 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNN2Q99439 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CNN2Q99439 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNN2Q99439 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNN2Q99439 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.95■□□□□ 0.94
CNN2Q99439 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNN2Q99439 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CNN2Q99439 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CNN2Q99439 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNN2Q99439 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CNN2Q99439 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CNN2Q99439 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNN2Q99439 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CNN2Q99439 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.94■□□□□ 0.94
CNN2Q99439 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.93■□□□□ 0.94
CNN2Q99439 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.93■□□□□ 0.94
CNN2Q99439 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CNN2Q99439 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.93■□□□□ 0.94
CNN2Q99439 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.93■□□□□ 0.94
CNN2Q99439 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CNN2Q99439 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNN2Q99439 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNN2Q99439 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNN2Q99439 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNN2Q99439 AC092296.2-201ENST00000589470 999 ntBASIC20.92■□□□□ 0.94
CNN2Q99439 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNN2Q99439 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNN2Q99439 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms