Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.84■■■□□ 2.53
ARXQ96QS3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ARXQ96QS3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
ARXQ96QS3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ARXQ96QS3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.83■■■□□ 2.53
ARXQ96QS3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ARXQ96QS3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ARXQ96QS3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.83■■■□□ 2.53
ARXQ96QS3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
ARXQ96QS3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
ARXQ96QS3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ARXQ96QS3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.52
ARXQ96QS3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ARXQ96QS3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ARXQ96QS3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
ARXQ96QS3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC30.81■■■□□ 2.52
ARXQ96QS3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.81■■■□□ 2.52
ARXQ96QS3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
ARXQ96QS3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC30.81■■■□□ 2.52
ARXQ96QS3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.81■■■□□ 2.52
ARXQ96QS3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ARXQ96QS3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ARXQ96QS3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.8■■■□□ 2.52
ARXQ96QS3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
ARXQ96QS3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.8■■■□□ 2.52
ARXQ96QS3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.8■■■□□ 2.52
ARXQ96QS3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ARXQ96QS3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
ARXQ96QS3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.79■■■□□ 2.52
ARXQ96QS3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
ARXQ96QS3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ARXQ96QS3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ARXQ96QS3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.78■■■□□ 2.52
ARXQ96QS3 BX255925.1-201ENST00000566954 1854 ntBASIC30.78■■■□□ 2.52
ARXQ96QS3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC30.78■■■□□ 2.52
ARXQ96QS3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ARXQ96QS3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ARXQ96QS3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
ARXQ96QS3 AL356740.2-201ENST00000601559 647 ntBASIC30.77■■■□□ 2.52
ARXQ96QS3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.52
ARXQ96QS3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
ARXQ96QS3 AC142381.2-201ENST00000566120 298 ntBASIC30.76■■■□□ 2.51
ARXQ96QS3 AC010997.5-201ENST00000609182 354 ntBASIC30.76■■■□□ 2.51
ARXQ96QS3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
ARXQ96QS3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ARXQ96QS3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
ARXQ96QS3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
ARXQ96QS3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.75■■■□□ 2.51
ARXQ96QS3 MIR6724-1-201ENST00000616420 92 ntBASIC30.75■■■□□ 2.51
ARXQ96QS3 MIR6724-2-201ENST00000616483 92 ntBASIC30.75■■■□□ 2.51
ARXQ96QS3 MIR6724-4-201ENST00000617390 92 ntBASIC30.75■■■□□ 2.51
ARXQ96QS3 MIR6724-3-201ENST00000622482 92 ntBASIC30.75■■■□□ 2.51
ARXQ96QS3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC30.75■■■□□ 2.51
ARXQ96QS3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.74■■■□□ 2.51
ARXQ96QS3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.74■■■□□ 2.51
ARXQ96QS3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.74■■■□□ 2.51
ARXQ96QS3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
ARXQ96QS3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ARXQ96QS3 KRT18P10-201ENST00000388836 1287 ntBASIC30.73■■■□□ 2.51
ARXQ96QS3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.73■■■□□ 2.51
ARXQ96QS3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ARXQ96QS3 AC142086.6-201ENST00000621154 1765 ntBASIC30.73■■■□□ 2.51
ARXQ96QS3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ARXQ96QS3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ARXQ96QS3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
ARXQ96QS3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ARXQ96QS3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARXQ96QS3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.71■■■□□ 2.51
ARXQ96QS3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.71■■■□□ 2.51
ARXQ96QS3 AC106739.1-201ENST00000617035 715 ntBASIC30.71■■■□□ 2.51
ARXQ96QS3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARXQ96QS3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ARXQ96QS3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ARXQ96QS3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.7■■■□□ 2.51
ARXQ96QS3 AC120024.1-201ENST00000562672 995 ntBASIC30.7■■■□□ 2.51
ARXQ96QS3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.7■■■□□ 2.5
ARXQ96QS3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARXQ96QS3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARXQ96QS3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ARXQ96QS3 PBX2P1-201ENST00000493219 1291 ntBASIC30.69■■■□□ 2.5
ARXQ96QS3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
ARXQ96QS3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ARXQ96QS3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.68■■■□□ 2.5
ARXQ96QS3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARXQ96QS3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARXQ96QS3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.68■■■□□ 2.5
ARXQ96QS3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.68■■■□□ 2.5
ARXQ96QS3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.68■■■□□ 2.5
ARXQ96QS3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARXQ96QS3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARXQ96QS3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
ARXQ96QS3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.66■■■□□ 2.5
ARXQ96QS3 AP004609.3-201ENST00000610705 1884 ntBASIC30.66■■■□□ 2.5
ARXQ96QS3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.66■■■□□ 2.5
ARXQ96QS3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARXQ96QS3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.66■■■□□ 2.5
ARXQ96QS3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARXQ96QS3 AC142472.1-201ENST00000612013 1741 ntBASIC30.65■■■□□ 2.5
ARXQ96QS3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC30.65■■■□□ 2.5
ARXQ96QS3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.65■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms