Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC6A18Q96N87 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC6A18Q96N87 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC6A18Q96N87 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.48■■□□□ 1.35
SLC6A18Q96N87 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.48■■□□□ 1.35
SLC6A18Q96N87 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.48■■□□□ 1.35
SLC6A18Q96N87 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC6A18Q96N87 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SLC6A18Q96N87 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC6A18Q96N87 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.48■■□□□ 1.35
SLC6A18Q96N87 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC6A18Q96N87 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC6A18Q96N87 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.47■■□□□ 1.35
SLC6A18Q96N87 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.47■■□□□ 1.35
SLC6A18Q96N87 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
SLC6A18Q96N87 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.47■■□□□ 1.35
SLC6A18Q96N87 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC6A18Q96N87 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC6A18Q96N87 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SLC6A18Q96N87 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
SLC6A18Q96N87 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
SLC6A18Q96N87 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.46■■□□□ 1.35
SLC6A18Q96N87 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
SLC6A18Q96N87 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SLC6A18Q96N87 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SLC6A18Q96N87 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC6A18Q96N87 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.45■■□□□ 1.34
SLC6A18Q96N87 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.45■■□□□ 1.34
SLC6A18Q96N87 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.45■■□□□ 1.34
SLC6A18Q96N87 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC6A18Q96N87 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC6A18Q96N87 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
SLC6A18Q96N87 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SLC6A18Q96N87 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 AC010997.5-201ENST00000609182 354 ntBASIC23.44■■□□□ 1.34
SLC6A18Q96N87 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
SLC6A18Q96N87 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SLC6A18Q96N87 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.43■■□□□ 1.34
SLC6A18Q96N87 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SLC6A18Q96N87 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
SLC6A18Q96N87 MTDHP2-201ENST00000601468 714 ntBASIC23.43■■□□□ 1.34
SLC6A18Q96N87 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.43■■□□□ 1.34
SLC6A18Q96N87 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.43■■□□□ 1.34
SLC6A18Q96N87 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SLC6A18Q96N87 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.43■■□□□ 1.34
SLC6A18Q96N87 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SLC6A18Q96N87 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 AC131281.2-201ENST00000520478 145 ntBASIC23.42■■□□□ 1.34
SLC6A18Q96N87 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.42■■□□□ 1.34
SLC6A18Q96N87 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SLC6A18Q96N87 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SLC6A18Q96N87 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.4■■□□□ 1.34
SLC6A18Q96N87 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.4■■□□□ 1.34
SLC6A18Q96N87 AL117332.1-201ENST00000622628 974 ntBASIC23.4■■□□□ 1.34
SLC6A18Q96N87 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.4■■□□□ 1.34
SLC6A18Q96N87 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
SLC6A18Q96N87 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SLC6A18Q96N87 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
SLC6A18Q96N87 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SLC6A18Q96N87 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SLC6A18Q96N87 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.39■■□□□ 1.33
SLC6A18Q96N87 FOXO3B-201ENST00000395675 1928 ntBASIC23.39■■□□□ 1.33
SLC6A18Q96N87 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.39■■□□□ 1.33
SLC6A18Q96N87 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC6A18Q96N87 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.38■■□□□ 1.33
SLC6A18Q96N87 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.38■■□□□ 1.33
SLC6A18Q96N87 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.38■■□□□ 1.33
SLC6A18Q96N87 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.38■■□□□ 1.33
SLC6A18Q96N87 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SLC6A18Q96N87 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SLC6A18Q96N87 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms