Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.44■□□□□ 0.86
SEH1LQ96EE3 LINC01124-201ENST00000409786 2117 ntBASIC20.44■□□□□ 0.86
SEH1LQ96EE3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SEH1LQ96EE3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SEH1LQ96EE3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
SEH1LQ96EE3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.42■□□□□ 0.86
SEH1LQ96EE3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SEH1LQ96EE3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEH1LQ96EE3 RARRES2P2-201ENST00000394842 485 ntBASIC20.42■□□□□ 0.86
SEH1LQ96EE3 AC007029.1-201ENST00000604183 313 ntBASIC20.42■□□□□ 0.86
SEH1LQ96EE3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEH1LQ96EE3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SEH1LQ96EE3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.42■□□□□ 0.86
SEH1LQ96EE3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEH1LQ96EE3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEH1LQ96EE3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SEH1LQ96EE3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.41■□□□□ 0.86
SEH1LQ96EE3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SEH1LQ96EE3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEH1LQ96EE3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEH1LQ96EE3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEH1LQ96EE3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEH1LQ96EE3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEH1LQ96EE3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.4■□□□□ 0.86
SEH1LQ96EE3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.4■□□□□ 0.86
SEH1LQ96EE3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.4■□□□□ 0.86
SEH1LQ96EE3 AC093536.1-201ENST00000569153 554 ntBASIC20.4■□□□□ 0.86
SEH1LQ96EE3 MIR3960-201ENST00000583311 91 ntBASIC20.4■□□□□ 0.86
SEH1LQ96EE3 AP003733.4-201ENST00000623785 1697 ntBASIC20.4■□□□□ 0.86
SEH1LQ96EE3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.39■□□□□ 0.86
SEH1LQ96EE3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.39■□□□□ 0.86
SEH1LQ96EE3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SEH1LQ96EE3 AC012676.1-201ENST00000574705 1949 ntBASIC20.39■□□□□ 0.86
SEH1LQ96EE3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.39■□□□□ 0.86
SEH1LQ96EE3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEH1LQ96EE3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.39■□□□□ 0.85
SEH1LQ96EE3 RP9P-202ENST00000450133 1212 ntBASIC20.39■□□□□ 0.85
SEH1LQ96EE3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.39■□□□□ 0.85
SEH1LQ96EE3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEH1LQ96EE3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SEH1LQ96EE3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SEH1LQ96EE3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SEH1LQ96EE3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SEH1LQ96EE3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.38■□□□□ 0.85
SEH1LQ96EE3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEH1LQ96EE3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEH1LQ96EE3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEH1LQ96EE3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEH1LQ96EE3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEH1LQ96EE3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SEH1LQ96EE3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEH1LQ96EE3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEH1LQ96EE3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEH1LQ96EE3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEH1LQ96EE3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SEH1LQ96EE3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SEH1LQ96EE3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SEH1LQ96EE3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEH1LQ96EE3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEH1LQ96EE3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.35■□□□□ 0.85
SEH1LQ96EE3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEH1LQ96EE3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEH1LQ96EE3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEH1LQ96EE3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SEH1LQ96EE3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEH1LQ96EE3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEH1LQ96EE3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEH1LQ96EE3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEH1LQ96EE3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEH1LQ96EE3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SEH1LQ96EE3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.34■□□□□ 0.85
SEH1LQ96EE3 AC026202.3-201ENST00000600805 1127 ntBASIC20.34■□□□□ 0.85
SEH1LQ96EE3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEH1LQ96EE3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEH1LQ96EE3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SEH1LQ96EE3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SEH1LQ96EE3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.33■□□□□ 0.85
SEH1LQ96EE3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SEH1LQ96EE3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SEH1LQ96EE3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SEH1LQ96EE3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SEH1LQ96EE3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEH1LQ96EE3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEH1LQ96EE3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEH1LQ96EE3 AC009831.1-201ENST00000580420 1582 ntBASIC20.33■□□□□ 0.84
SEH1LQ96EE3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms